RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ERCC4Q92889 916 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
HDAC9-210ENST00000428307 MRVI1Q9Y6F6 885 aa12.05□□□□□ -0.48
HDAC9-210ENST00000428307 KINO60870 393 aaKnown RBP12.04□□□□□ -0.48
HDAC9-210ENST00000428307 MMP1P03956 469 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 FAM160A1Q05DH4 1040 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 NR5A1Q13285 461 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 SAFBQ15424 915 aaKnown RBP eCLIP12.04□□□□□ -0.48
HDAC9-210ENST00000428307 SASS6Q6UVJ0 657 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 TMC4Q7Z404 712 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 AMOTL1Q8IY63 956 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 TEX11Q8IYF3 940 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 ENGASEQ8NFI3 743 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 PIBF1Q8WXW3 757 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 MXD3Q9BW11 206 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 NID2Q14112 1375 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 GPR75-ASB3A0A0A6YYF3 556 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 ESPNB1AK53 854 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 NDUFA8P51970 172 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 SLC39A14Q15043 492 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 ANO6Q4KMQ2 910 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 NOSTRINQ8IVI9 506 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 TBC1D22AQ8WUA7 517 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
HDAC9-210ENST00000428307 TMX4Q9H1E5 349 aaPredicted RBP12.04□□□□□ -0.48
HDAC9-210ENST00000428307 VPS54Q9P1Q0 977 aa12.04□□□□□ -0.48
HDAC9-210ENST00000428307 USP17L3A6NCW0 530 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 USP17L4A6NCW7 530 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 G3V3G9 751 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 WDHD1O75717 1129 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 ATP2B1P20020 1258 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 EN1Q05925 392 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 FUT2Q10981 343 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 EZH2Q15910 746 aaKnown RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 UVSSAQ2YD98 709 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 RCSD1Q6JBY9 416 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 RBM43Q6ZSC3 357 aaKnown RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 USP17L1Q7RTZ2 530 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 OXER1Q8TDS5 423 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 MASTLQ96GX5 879 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 RNF26Q9BY78 433 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 COA1Q9GZY4 146 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 DUOX1Q9NRD9 1551 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 A0A087WWV3 80 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 PKN1Q16512 942 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 POTEAQ6S8J7 498 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 LUZP1Q86V48 1076 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 ZNF444Q8N0Y2 327 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 RGS22Q8NE09 1264 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 CTCFLQ8NI51 663 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 SDF4Q9BRK5 362 aa12.03□□□□□ -0.48
HDAC9-210ENST00000428307 ANO8Q9HCE9 1232 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 RGS17Q9UGC6 210 aaPredicted RBP12.03□□□□□ -0.48
HDAC9-210ENST00000428307 A0A1W2PQ27 194 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 A0A1W2PQ64 194 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 A0A1W2PQD8 194 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 IGSF3O75054 1194 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 TSPY3P0CV98 308 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 TSPY8P0CW00 308 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 CALM1P0DP23 149 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 CALM2P0DP24 149 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 CALM3P0DP25 149 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 RHBDL3P58872 404 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 AXDND1Q5T1B0 1012 aaPredicted RBP12.02□□□□□ -0.49
HDAC9-210ENST00000428307 FMR1NBQ8N0W7 255 aaPredicted RBP12.02□□□□□ -0.49
HDAC9-210ENST00000428307 SRBD1Q8N5C6 995 aaKnown RBP12.02□□□□□ -0.49
HDAC9-210ENST00000428307 SHISA4Q96DD7 197 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 MAP3K14Q99558 947 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 RBM28Q9NW13 759 aaKnown RBP12.02□□□□□ -0.49
HDAC9-210ENST00000428307 CHD4Q14839 1912 aa12.02□□□□□ -0.49
HDAC9-210ENST00000428307 DDAH1O94760 285 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 ADCY5O95622 1261 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 PICALMQ13492 652 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 TMTC3Q6ZXV5 915 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 C2CD5Q86YS7 1000 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 SLF2Q8IX21 1173 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 CERS5Q8N5B7 392 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 FAM200AQ8TCP9 573 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 DNAJC25Q9H1X3 360 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 KCNQ5Q9NR82 932 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 STX8Q9UNK0 236 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 FLT1P17948 1338 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 FAM205AQ6ZU69 1335 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 PRPF3O43395 683 aaKnown RBP12.01□□□□□ -0.49
HDAC9-210ENST00000428307 CHRNA5P30532 468 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 TOB1P50616 345 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-210ENST00000428307 SCNN1DP51172 638 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 PTPAQ15257 358 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 KLHL34Q8N239 644 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 FAM163AQ96GL9 167 aaPredicted RBP12.01□□□□□ -0.49
HDAC9-210ENST00000428307 DBNDD1Q9H9R9 158 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 CABP5Q9NP86 173 aa12.01□□□□□ -0.49
HDAC9-210ENST00000428307 TTF2Q9UNY4 1162 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms