RNA–Protein interactions for RNA: ENST00000428214.5

PEX1-203, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 1 (best) BASIC

Gene PEX1, Length 3,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-203ENST00000428214 GIMAP6Q6P9H5 292 aa13.02□□□□□ -0.32
PEX1-203ENST00000428214 FANCBQ8NB91 859 aa13.02□□□□□ -0.32
PEX1-203ENST00000428214 TBC1D22AQ8WUA7 517 aa13.02□□□□□ -0.32
PEX1-203ENST00000428214 PGBD1Q96JS3 809 aa13.02□□□□□ -0.32
PEX1-203ENST00000428214 GOLGA8HP0CJ92 632 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 C8orf76Q96K31 380 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 CDK8P49336 464 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 RTN1Q16799 776 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 UPF1Q92900 1129 aaKnown RBP eCLIP13.02□□□□□ -0.33
PEX1-203ENST00000428214 TDRD3Q9H7E2 651 aaKnown RBP13.02□□□□□ -0.33
PEX1-203ENST00000428214 MKNK2Q9HBH9 465 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 MYH6P13533 1939 aa13.02□□□□□ -0.33
PEX1-203ENST00000428214 FAM205CA6NFA0 338 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 LIG1P18858 919 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 PDCP20941 246 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 PODNQ7Z5L7 613 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 FBXO18Q8NFZ0 1043 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 EYA3Q99504 573 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 NOL10Q9BSC4 688 aaKnown RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.01□□□□□ -0.33
PEX1-203ENST00000428214 DNAJC18Q9H819 358 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 ERICH2A1L162 156 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 DDTLA6NHG4 134 aaPredicted RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 ORC4O43929 436 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 EGFRP00533 1210 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 PRMT6Q96LA8 375 aaPredicted RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 STX8Q9UNK0 236 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 PSMD14O00487 310 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 LDHCP07864 332 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 FUT2Q10981 343 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 SRBD1Q8N5C6 995 aaKnown RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 LEO1Q8WVC0 666 aaPredicted RBP13.01□□□□□ -0.33
PEX1-203ENST00000428214 CLIC4Q9Y696 253 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 SIPA1L1O43166 1804 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 KIF13BQ9NQT8 1826 aa13.01□□□□□ -0.33
PEX1-203ENST00000428214 IARSP41252 1262 aaKnown RBP13□□□□□ -0.33
PEX1-203ENST00000428214 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
PEX1-203ENST00000428214 KRT40Q6A162 431 aa13□□□□□ -0.33
PEX1-203ENST00000428214 CLRN2A0PK11 232 aa13□□□□□ -0.33
PEX1-203ENST00000428214 RASSF7Q02833 373 aa13□□□□□ -0.33
PEX1-203ENST00000428214 NR5A1Q13285 461 aa13□□□□□ -0.33
PEX1-203ENST00000428214 SART3Q15020 963 aaKnown RBP13□□□□□ -0.33
PEX1-203ENST00000428214 IL27Q8NEV9 243 aa13□□□□□ -0.33
PEX1-203ENST00000428214 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
PEX1-203ENST00000428214 FRMD4AQ9P2Q2 1039 aaPredicted RBP13□□□□□ -0.33
PEX1-203ENST00000428214 FAM198AQ9UFP1 575 aa13□□□□□ -0.33
PEX1-203ENST00000428214 PTGER2P43116 358 aa13□□□□□ -0.33
PEX1-203ENST00000428214 PDE4BQ07343 736 aa13□□□□□ -0.33
PEX1-203ENST00000428214 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
PEX1-203ENST00000428214 STRIP1Q5VSL9 837 aa13□□□□□ -0.33
PEX1-203ENST00000428214 IQCA1Q86XH1 822 aa13□□□□□ -0.33
PEX1-203ENST00000428214 LARGE2Q8N3Y3 721 aa13□□□□□ -0.33
PEX1-203ENST00000428214 TEKT1Q969V4 418 aa13□□□□□ -0.33
PEX1-203ENST00000428214 VPS54Q9P1Q0 977 aa13□□□□□ -0.33
PEX1-203ENST00000428214 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
PEX1-203ENST00000428214 A0A087WWV3 80 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 WNT7AO00755 349 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 AKR1B1P15121 316 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 PKN1Q16512 942 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 CRACR2BQ8N4Y2 399 aaPredicted RBP12.99□□□□□ -0.33
PEX1-203ENST00000428214 CEP95Q96GE4 821 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 ZBTB22O15209 634 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 TSPY3P0CV98 308 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 TSPY8P0CW00 308 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
PEX1-203ENST00000428214 JAG1P78504 1218 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 KIF23Q02241 960 aaPredicted RBP12.99□□□□□ -0.33
PEX1-203ENST00000428214 MRVI1Q9Y6F6 885 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 V9GY48 417 aaPredicted RBP12.99□□□□□ -0.33
PEX1-203ENST00000428214 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 NFKBIEO00221 500 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 XRCC6P12956 609 aaKnown RBP eCLIP12.99□□□□□ -0.33
PEX1-203ENST00000428214 CAMK4Q16566 473 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 SPATA32Q96LK8 384 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 BCS1LQ9Y276 419 aa12.99□□□□□ -0.33
PEX1-203ENST00000428214 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 BTBD18B2RXH4 712 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 CCDC93Q567U6 631 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 C16orf86Q6ZW13 317 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
PEX1-203ENST00000428214 FMNL1O95466 1100 aaPredicted RBP12.98□□□□□ -0.33
PEX1-203ENST00000428214 IFNAR1P17181 557 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 KRT85P78386 507 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 MTFR1LQ9H019 292 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 LRRC47Q8N1G4 583 aaKnown RBP12.98□□□□□ -0.33
PEX1-203ENST00000428214 TMEM47Q9BQJ4 181 aa12.98□□□□□ -0.33
PEX1-203ENST00000428214 OSBPL5Q9H0X9 879 aaPredicted RBP12.98□□□□□ -0.33
PEX1-203ENST00000428214 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 RRP1BQ14684 758 aaKnown RBP12.97□□□□□ -0.33
PEX1-203ENST00000428214 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 GPKOWQ92917 476 aaPredicted RBP eCLIP12.97□□□□□ -0.33
PEX1-203ENST00000428214 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 MYH8P13535 1937 aa12.97□□□□□ -0.33
PEX1-203ENST00000428214 CYTH3O43739 400 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms