RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ZKSCAN3Q9BRR0 538 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ZSWIM4Q9H7M6 989 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 RYDENQ9NUL5 291 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 ZHX1Q9UKY1 873 aaPredicted RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 NEMFO60524 1076 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TNFAIP3P21580 790 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 GJB2P29033 226 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ZNF131P52739 623 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 SARNPP82979 210 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 RAPGEF1Q13905 1077 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TFDP1Q14186 410 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 KIF18AQ8NI77 898 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TRIM75PA6NK02 468 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 PPP1R12AO14974 1030 aaPredicted RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 ALDH1L1O75891 902 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ANXA13P27216 316 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 SLC1A4P43007 532 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 PPP2R5AQ15172 486 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 EGFL6Q8IUX8 553 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 RBM46Q8TBY0 533 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 PIDD1Q9HB75 910 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 CNPY2Q9Y2B0 182 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 PPIP5K1Q6PFW1 1433 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 GRM8O00222 908 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 DALRD3Q5D0E6 543 aaKnown RBP6.37□□□□□ -1.39
HERC4-206ENST00000427635 MFSD4BQ5TF39 518 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TRIM50Q86XT4 487 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 SMC5Q8IY18 1101 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 CHCHD4Q8N4Q1 142 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 TSGA10Q9BZW7 698 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ARHGEF11O15085 1522 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 CFTRP13569 1480 aa6.37□□□□□ -1.39
HERC4-206ENST00000427635 ARHGEF10O15013 1369 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 DHX29Q7Z478 1369 aaKnown RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 TCP10L2B9ZVM9 353 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 BIN1O00499 593 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 PDE8AO60658 829 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ATP5DP30049 168 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 PRPSAP1Q14558 356 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 SLC10A4Q96EP9 437 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 RSPH9Q9H1X1 276 aaPredicted RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 ANAPC5Q9UJX4 755 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 PNMA3Q9UL41 463 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 RIMS2Q9UQ26 1411 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 SYCE3A1L190 88 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 RNF113AO15541 343 aaKnown RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 CCNT1O60563 726 aaKnown RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 PUM3Q15397 648 aaKnown RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 VWA3BQ502W6 1294 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 CERKQ8TCT0 537 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 KCNG4Q8TDN1 519 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 TTC1Q99614 292 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 NRBP2Q9NSY0 501 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 TRPM2O94759 1503 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 CCDC160A6NGH7 325 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 CIB2O75838 187 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ABL2P42684 1182 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 SEPT6Q14141 434 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 FAM196AQ6ZSG2 479 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 MAEAQ7L5Y9 396 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 USP40Q9NVE5 1235 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ZBBXA8MT70 800 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 H0YCG3 227 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 USP14P54578 494 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 KRT83P78385 493 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 KRT81Q14533 505 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 PPFIBP2Q8ND30 876 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 SPDYE1Q8NFV5 336 aaPredicted RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 HELBQ8NG08 1087 aaPredicted RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 SELENOSQ9BQE4 189 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 LZTS2Q9BRK4 669 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ABCC5O15440 1437 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 ZNF18P17022 549 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 DCUN1D2Q6PH85 259 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 KSR2Q6VAB6 950 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 FNBP4Q8N3X1 1017 aaPredicted RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 CSRNP1Q96S65 589 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 CCDC68Q9H2F9 335 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 KCNH4Q9UQ05 1017 aa6.36□□□□□ -1.39
HERC4-206ENST00000427635 MRPL11Q9Y3B7 192 aaKnown RBP6.36□□□□□ -1.39
HERC4-206ENST00000427635 ADCY7P51828 1080 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 NUDT18Q6ZVK8 323 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 NFATC2IPQ8NCF5 419 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 VPS37AQ8NEZ2 397 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 DHX38Q92620 1227 aaKnown RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 DHX58Q96C10 678 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 MMS19Q96T76 1030 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 SEC62Q99442 399 aaKnown RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 MIS12Q9H081 205 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 RPRD2Q5VT52 1461 aaKnown RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 IQGAP2Q13576 1575 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 DNMBPQ6XZF7 1577 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 YTHDC2Q9H6S0 1430 aaKnown RBP6.35□□□□□ -1.39
HERC4-206ENST00000427635 SPOPO43791 374 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 LETM2Q2VYF4 491 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 MCTP2Q6DN12 878 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 ISM2Q6H9L7 571 aa6.35□□□□□ -1.39
HERC4-206ENST00000427635 MIER3Q7Z3K6 550 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms