RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 GCLCP48506 637 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 MIGA1Q8NAN2 632 aa12.49□□□□□ -0.41
HDLBP-213ENST00000427007 EAF2Q96CJ1 260 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 TMOD4Q9NZQ9 345 aa12.49□□□□□ -0.41
HDLBP-213ENST00000427007 NOP58Q9Y2X3 529 aaKnown RBP12.49□□□□□ -0.41
HDLBP-213ENST00000427007 BACE1P56817 501 aa12.48□□□□□ -0.41
HDLBP-213ENST00000427007 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-213ENST00000427007 FOXP4Q8IVH2 680 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-213ENST00000427007 WDR18Q9BV38 432 aa12.48□□□□□ -0.41
HDLBP-213ENST00000427007 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.48□□□□□ -0.412e-10■■□□□ 13.3
HDLBP-213ENST00000427007 PAK6Q9NQU5 681 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-213ENST00000427007 RBM27Q9P2N5 1060 aaKnown RBP12.48□□□□□ -0.41
HDLBP-213ENST00000427007 ZBTB21Q9ULJ3 1066 aa12.48□□□□□ -0.41
HDLBP-213ENST00000427007 EXOC6BQ9Y2D4 811 aa12.48□□□□□ -0.41
HDLBP-213ENST00000427007 ALPK3Q96L96 1907 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 HLA-DOAP06340 250 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 USP5P45974 858 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 TRIM32Q13049 653 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 CEP85Q6P2H3 762 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 METTL16Q86W50 562 aaKnown RBP12.47□□□□□ -0.41
HDLBP-213ENST00000427007 MIER1Q8N108 512 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 MAGEB6Q8N7X4 407 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 P2RX7Q99572 595 aaKnown RBP12.47□□□□□ -0.41
HDLBP-213ENST00000427007 ANTXR1Q9H6X2 564 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 MORF4L1Q9UBU8 362 aa12.47□□□□□ -0.41
HDLBP-213ENST00000427007 HMGCRP04035 888 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 CYP2B6P20813 491 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 HERVK_113P62684 666 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
HDLBP-213ENST00000427007 AACSQ86V21 672 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 DIS3LQ8TF46 1054 aaKnown RBP12.46□□□□□ -0.41
HDLBP-213ENST00000427007 PAWRQ96IZ0 340 aaKnown RBP12.46□□□□□ -0.41
HDLBP-213ENST00000427007 TXNRD2Q9NNW7 524 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 GJD2Q9UKL4 321 aa12.46□□□□□ -0.41
HDLBP-213ENST00000427007 NAV1Q8NEY1 1877 aa12.46□□□□□ -0.42
HDLBP-213ENST00000427007 DDX60LQ5H9U9 1706 aaKnown RBP12.45□□□□□ -0.42
HDLBP-213ENST00000427007 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 EVI5O60447 810 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 GH2P01242 217 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 HOXA7P31268 230 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-213ENST00000427007 TRIB2Q92519 343 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 PAGR1Q9BTK6 254 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 CRISPLD2Q9H0B8 497 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 NR2E3Q9Y5X4 410 aa12.45□□□□□ -0.42
HDLBP-213ENST00000427007 RPTORQ8N122 1335 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 IGSF3O75054 1194 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 MAP3K12Q12852 859 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 Q3C1V9 767 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 GPRC5AQ8NFJ5 357 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 HMX1Q9NP08 348 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-213ENST00000427007 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 GINM1Q9NU53 330 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 RBPJLQ9UBG7 517 aa12.44□□□□□ -0.42
HDLBP-213ENST00000427007 APBB1O00213 710 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 ERVK-9P63128 1117 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 ERVK-24P63145 666 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 RAB3GAP1Q15042 981 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 TATDN1Q6P1N9 297 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 USP17L2Q6R6M4 530 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 NECAB2Q7Z6G3 386 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 ERC1Q8IUD2 1116 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 CCAR1Q8IX12 1150 aaKnown RBP12.43□□□□□ -0.42
HDLBP-213ENST00000427007 FEZ1Q99689 392 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 NUDT12Q9BQG2 462 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 PORCNQ9H237 461 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 SERPINB13Q9UIV8 391 aa12.43□□□□□ -0.42
HDLBP-213ENST00000427007 PRKAR2AP13861 404 aaKnown RBP12.42□□□□□ -0.42
HDLBP-213ENST00000427007 CAPN2P17655 700 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 PLCD1P51178 756 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 PDE3AQ14432 1141 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 CERKLQ49MI3 558 aaPredicted RBP12.42□□□□□ -0.42
HDLBP-213ENST00000427007 POTEEQ6S8J3 1075 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 TTC6Q86TZ1 520 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 CERS3Q8IU89 383 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 SOCS4Q8WXH5 440 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 RIOK1Q9BRS2 568 aaKnown RBP12.42□□□□□ -0.42
HDLBP-213ENST00000427007 EHD4Q9H223 541 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 PRO3102Q9H379 93 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 CEP290O15078 2479 aa12.42□□□□□ -0.42
HDLBP-213ENST00000427007 ZBED9Q6R2W3 1325 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 MAPK4P31152 587 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 EVX2Q03828 476 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 CCL14Q16627 93 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 ABCB5Q2M3G0 1257 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
HDLBP-213ENST00000427007 GPR142Q7Z601 462 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 C7orf61Q8IZ16 206 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 ANKLE1Q8NAG6 615 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 ACER1Q8TDN7 264 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
HDLBP-213ENST00000427007 CWC22Q9HCG8 908 aaKnown RBP12.41□□□□□ -0.42
HDLBP-213ENST00000427007 STAP2Q9UGK3 403 aa12.41□□□□□ -0.42
HDLBP-213ENST00000427007 FRMPD3Q5JV73 1810 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms