RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 LRWD1Q9UFC0 647 aa11.4□□□□□ -0.59
SP1-202ENST00000426431 STAP2Q9UGK3 403 aa11.4□□□□□ -0.59
SP1-202ENST00000426431 CALCRLQ16602 461 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 GOLGA1Q92805 767 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 P4HA1P13674 534 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 PDE6AP16499 860 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 SMCR8Q8TEV9 937 aaPredicted RBP11.39□□□□□ -0.59
SP1-202ENST00000426431 SKILP12757 684 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 LIN9Q5TKA1 542 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 SETBP1Q9Y6X0 1596 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 TRMT1LQ7Z2T5 733 aaKnown RBP11.39□□□□□ -0.59
SP1-202ENST00000426431 CCDC84Q86UT8 332 aaPredicted RBP11.39□□□□□ -0.59
SP1-202ENST00000426431 ZSCAN10Q96SZ4 725 aaPredicted RBP11.39□□□□□ -0.59
SP1-202ENST00000426431 CHRNDQ07001 517 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 TAF3Q5VWG9 929 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 MAPKAPK5Q8IW41 473 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 BRPF3Q9ULD4 1205 aa11.39□□□□□ -0.59
SP1-202ENST00000426431 TULP4Q9NRJ4 1543 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 TRAF5O00463 557 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 GPR162Q16538 588 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 ZNF710Q8N1W2 664 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 TNS3Q68CZ2 1445 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 GAS8O95995 478 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 NPR1P16066 1061 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 PIK3AP1Q6ZUJ8 805 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 DDX17Q92841 729 aaKnown RBP11.38□□□□□ -0.59
SP1-202ENST00000426431 CCDC113Q9H0I3 377 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 E7EWF7 191 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 LAD1O00515 517 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 HSF2BPO75031 334 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 TRPC3Q13507 836 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 CCDC93Q567U6 631 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.38□□□□□ -0.59
SP1-202ENST00000426431 JPH2Q9BR39 696 aaPredicted RBP11.38□□□□□ -0.59
SP1-202ENST00000426431 PDE4DQ08499 809 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 ASPRV1Q53RT3 343 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 IFNL3Q8IZI9 196 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
SP1-202ENST00000426431 BCS1LQ9Y276 419 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 MED14O60244 1454 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 KDM2BQ8NHM5 1336 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 ZNF174Q15697 407 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 USPL1Q5W0Q7 1092 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 ZNF654Q8IZM8 581 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 MYO3BQ8WXR4 1341 aa11.38□□□□□ -0.59
SP1-202ENST00000426431 POLR3GO15318 223 aaPredicted RBP11.38□□□□□ -0.59
SP1-202ENST00000426431 CERKLQ49MI3 558 aaPredicted RBP11.38□□□□□ -0.59
SP1-202ENST00000426431 TTC14Q96N46 770 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 ZKSCAN3Q9BRR0 538 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 DNAJC25Q9H1X3 360 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 SERPINB2P05120 415 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 TNNC1P63316 161 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 BMS1Q14692 1282 aaKnown RBP11.37□□□□□ -0.59
SP1-202ENST00000426431 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 TRPM1Q7Z4N2 1603 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 FAM227BQ96M60 508 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 C16orf45Q96MC5 204 aaPredicted RBP11.37□□□□□ -0.59
SP1-202ENST00000426431 TRAPPC10P48553 1259 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 TTLL7Q6ZT98 887 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 MIS12Q9H081 205 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 RTEL1Q9NZ71 1219 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 GRM1Q13255 1194 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 IQCGQ9H095 443 aaKnown RBP11.37□□□□□ -0.59
SP1-202ENST00000426431 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
SP1-202ENST00000426431 MTRF1LQ9UGC7 380 aaKnown RBP11.37□□□□□ -0.59
SP1-202ENST00000426431 JAG2Q9Y219 1238 aa11.37□□□□□ -0.59
SP1-202ENST00000426431 OPA1O60313 960 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 N4BP1O75113 896 aaKnown RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 BIRC3Q13489 604 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 KRT40Q6A162 431 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 TRIM6Q9C030 488 aaPredicted RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 POLR2MP0CAP2 368 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 CTR9Q6PD62 1173 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 ATP6V0A2Q9Y487 856 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 ISM2Q6H9L7 571 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 GTF3C6Q969F1 213 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 TRMT1Q9NXH9 659 aaKnown RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 IMPACTQ9P2X3 320 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 TNNQ9UQP3 1299 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 USP17L21D6R901 530 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 BCRP11274 1271 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 PAK1Q13153 545 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 CROCCP2Q86T23 111 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 NOC4LQ9BVI4 516 aaKnown RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 PCDHB13Q9Y5F0 798 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 USP31Q70CQ4 1352 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 CCDC169A6NNP5 214 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 AKR1B15C9JRZ8 316 aaPredicted RBP11.36□□□□□ -0.59
SP1-202ENST00000426431 CUEDC2Q9H467 287 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 CLSTN2Q9H4D0 955 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 LPXNO60711 386 aa11.36□□□□□ -0.59
SP1-202ENST00000426431 CCDC129Q6ZRS4 1044 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms