RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 SASH3O75995 380 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 DEXIO95424 95 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 BCAMP50895 628 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 RBL2Q08999 1139 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 NKX1-1Q15270 411 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 VGLL2Q8N8G2 317 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 IGSF22Q8N9C0 903 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 FANCBQ8NB91 859 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 NEK11Q8NG66 645 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 ATRIPQ8WXE1 791 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 TEX13AQ9BXU3 409 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 ABCF2Q9UG63 623 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 SRPRBQ9Y5M8 271 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 ABCC12Q96J65 1359 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 CCDC196A0A1B0GTZ2 297 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 CCDC175P0C221 793 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 SLC5A1P13866 664 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 OAS2P29728 719 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 GYS2P54840 703 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 SMC1AQ14683 1233 aaKnown RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 NR1I3Q14994 352 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 CC2D1AQ6P1N0 951 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 FOXP1Q9H334 677 aaPredicted RBP8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 CEP131Q9UPN4 1083 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 MRFAP1Q9Y605 127 aa8.58□□□□□ -1.04
SMARCC1-202ENST00000425518 STRCQ7RTU9 1775 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 TRIM75PA6NK02 468 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 SMIM22K7EJ46 135 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 PDE8AO60658 829 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 TBC1D8O95759 1140 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 SARSP49591 514 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 PLCD1P51178 756 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF174Q15697 407 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ALX1Q15699 326 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF654Q8IZM8 581 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF512BQ96KM6 892 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 CAMTA1Q9Y6Y1 1673 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ACTN4O43707 911 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ARID4AP29374 1257 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 CYP2C19P33261 490 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 HNRNPH2P55795 449 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ST5P78524 1137 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 KIF4BQ2VIQ3 1234 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 SDR42E1Q8WUS8 393 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 GOLGA1Q92805 767 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 V9GY48 417 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 STK36Q9NRP7 1315 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 CCT6AP40227 531 aaKnown RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 RAD9BQ6WBX8 426 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 CALCOCO1Q9P1Z2 691 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF142P52746 1687 aaPredicted RBP8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 MST1RQ04912 1400 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 TNS3Q68CZ2 1445 aa8.57□□□□□ -1.04
SMARCC1-202ENST00000425518 KIF5CO60282 957 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CD44P16070 742 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 FILIP1LQ4L180 1135 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 EARS2Q5JPH6 523 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 KIFC2Q96AC6 838 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CARD10Q9BWT7 1032 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 NWD2Q9ULI1 1742 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 KAT6BQ8WYB5 2073 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 A0A087X0B3 334 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CYP7A1P22680 504 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CASP14P31944 242 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 MCM6Q14566 821 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 SPATA1Q5VX52 437 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 DZIP3Q86Y13 1208 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 TRIML1Q8N9V2 468 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 BLZF1Q9H2G9 400 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CDHR2Q9BYE9 1310 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 A0A1B0GTH6 734 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 TFRCP02786 760 aaKnown RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 XBP1P17861 261 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 ERCC5P28715 1186 aaPredicted RBP8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 CHMP4BP1P59074 171 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 NT5DC1Q5TFE4 455 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 TMTC2Q8N394 836 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 RABGGTAQ92696 567 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 PAGE5Q96GU1 130 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 ADGRG1Q9Y653 693 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 MYH15Q9Y2K3 1946 aa8.56□□□□□ -1.04
SMARCC1-202ENST00000425518 TRPM3Q9HCF6 1732 aaPredicted RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 NOM1Q5C9Z4 860 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 RSRC2Q7L4I2 434 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 ZNF579Q8NAF0 562 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 VPS16Q9H269 839 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 TNKSO95271 1327 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 SYNRGQ9UMZ2 1314 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 CYP2D7A0A087X1C5 515 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 PES1O00541 588 aaKnown RBP8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 N4BP3O15049 544 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 CDC25AP30304 524 aa8.55□□□□□ -1.04
SMARCC1-202ENST00000425518 TXLNAP40222 546 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms