RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 METTL16Q86W50 562 aaKnown RBP18.46■□□□□ 0.55
SHOX2-202ENST00000425436 SLC44A5Q8NCS7 719 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 INTS4Q96HW7 963 aaKnown RBP18.46■□□□□ 0.55
SHOX2-202ENST00000425436 EHD4Q9H223 541 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 ZNF112Q9UJU3 913 aa18.46■□□□□ 0.55
SHOX2-202ENST00000425436 GABPAQ06546 454 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 GRM1Q13255 1194 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 PAXIP1Q6ZW49 1069 aaPredicted RBP18.45■□□□□ 0.54
SHOX2-202ENST00000425436 ANKRD13AQ8IZ07 590 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 CEP350Q5VT06 3117 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 OTOFQ9HC10 1997 aa18.45■□□□□ 0.54
SHOX2-202ENST00000425436 HAND2P61296 217 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 CTDSPL2Q05D32 466 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 PPARAQ07869 468 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 VGLL4Q14135 290 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 RAB3GAP1Q15042 981 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 SHROOM1Q2M3G4 852 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-202ENST00000425436 DSCC1Q9BVC3 393 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 ELP3Q9H9T3 547 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 INCENPQ9NQS7 918 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 SHMT1P34896 483 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 ZNF157P51786 506 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-202ENST00000425436 JAG1P78504 1218 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 KRT32Q14532 448 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 TSGA10IPQ3SY00 556 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 CYP4F22Q6NT55 531 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 RGMBQ6NW40 437 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 SLC10A4Q96EP9 437 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 GBP4Q96PP9 640 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.44■□□□□ 0.54
SHOX2-202ENST00000425436 CSADQ9Y600 493 aa18.44■□□□□ 0.54
SHOX2-202ENST00000425436 GDF11O95390 407 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 CDK8P49336 464 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 CUL4AQ13619 759 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 TATDN1Q6P1N9 297 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 CNKSR2Q8WXI2 1034 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 TMX3Q96JJ7 454 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 RBM8AQ9Y5S9 174 aaKnown RBP18.43■□□□□ 0.54
SHOX2-202ENST00000425436 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
SHOX2-202ENST00000425436 LAMB1P07942 1786 aa18.43■□□□□ 0.54
SHOX2-202ENST00000425436 RASSF10A6NK89 507 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 PRDM1O75626 825 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 CAP2P40123 477 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 MKRN3Q13064 507 aaKnown RBP18.42■□□□□ 0.54
SHOX2-202ENST00000425436 CREB3L3Q68CJ9 461 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 C16orf86Q6ZW13 317 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 ZSWIM6Q9HCJ5 1215 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 CYP46A1Q9Y6A2 500 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 SNCAIPQ9Y6H5 919 aa18.42■□□□□ 0.54
SHOX2-202ENST00000425436 MYH8P13535 1937 aa18.41■□□□□ 0.54
SHOX2-202ENST00000425436 DDX11L8A8MPP1 907 aa18.41■□□□□ 0.54
SHOX2-202ENST00000425436 CTNND1O60716 968 aaKnown RBP18.41■□□□□ 0.54
SHOX2-202ENST00000425436 MCM4P33991 863 aa18.41■□□□□ 0.54
SHOX2-202ENST00000425436 CERKLQ49MI3 558 aaPredicted RBP18.41■□□□□ 0.54
SHOX2-202ENST00000425436 CCDC84Q86UT8 332 aaPredicted RBP18.41■□□□□ 0.54
SHOX2-202ENST00000425436 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
SHOX2-202ENST00000425436 TACC3Q9Y6A5 838 aa18.41■□□□□ 0.54
SHOX2-202ENST00000425436 ZNF213O14771 459 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 CLEC17AQ6ZS10 378 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 RASEFQ8IZ41 740 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 SCYL3Q8IZE3 742 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 HHIPL1Q96JK4 782 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 ZSCAN31Q96LW9 406 aaPredicted RBP18.4■□□□□ 0.54
SHOX2-202ENST00000425436 NBPF3Q9H094 633 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 MKNK2Q9HBH9 465 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 ZMYM6O95789 1325 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 ATAD5Q96QE3 1844 aa18.4■□□□□ 0.54
SHOX2-202ENST00000425436 MPHOSPH10O00566 681 aaKnown RBP18.39■□□□□ 0.54
SHOX2-202ENST00000425436 SLC3A2P08195 630 aaKnown RBP18.39■□□□□ 0.54
SHOX2-202ENST00000425436 OPTNQ96CV9 577 aa18.39■□□□□ 0.54
SHOX2-202ENST00000425436 TTC14Q96N46 770 aa18.39■□□□□ 0.54
SHOX2-202ENST00000425436 UPF3BQ9BZI7 483 aaKnown RBP18.39■□□□□ 0.54
SHOX2-202ENST00000425436 ALDH8A1Q9H2A2 487 aaPredicted RBP18.39■□□□□ 0.54
SHOX2-202ENST00000425436 CTNNA3Q9UI47 895 aa18.39■□□□□ 0.54
SHOX2-202ENST00000425436 ANAPC4Q9UJX5 808 aa18.39■□□□□ 0.54
SHOX2-202ENST00000425436 LIMCH1Q9UPQ0 1083 aa18.39■□□□□ 0.54
SHOX2-202ENST00000425436 PCNTO95613 3336 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 UNCXA6NJT0 531 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 FAM155AB1AL88 458 aaPredicted RBP18.39■□□□□ 0.53
SHOX2-202ENST00000425436 SLC27A2O14975 620 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 GH2P01242 217 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 CASTP20810 708 aaKnown RBP18.39■□□□□ 0.53
SHOX2-202ENST00000425436 GJA5P36382 358 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 VEGFBP49765 207 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 ANKRD1Q15327 319 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 ABCB5Q2M3G0 1257 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 NOL9Q5SY16 702 aaKnown RBP18.39■□□□□ 0.53
SHOX2-202ENST00000425436 RUFY3Q7L099 469 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 RASAL3Q86YV0 1011 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 OTUD5Q96G74 571 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 CAPNS2Q96L46 248 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 JAKMIP1Q96N16 626 aaKnown RBP18.39■□□□□ 0.53
SHOX2-202ENST00000425436 PICK1Q9NRD5 415 aa18.39■□□□□ 0.53
SHOX2-202ENST00000425436 ROBO3Q96MS0 1386 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 DOCK1Q14185 1865 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 AOC2O75106 756 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 AKR1B1P15121 316 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 PTPRAP18433 802 aa18.38■□□□□ 0.53
SHOX2-202ENST00000425436 PDE4BQ07343 736 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms