RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 BAG3O95817 575 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 ASNSP08243 561 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 PABPC4Q13310 644 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATG4B-209ENST00000425239 MTMR2Q13614 643 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 TTC39AQ5SRH9 613 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 ZKSCAN2Q63HK3 967 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 DIS3LQ8TF46 1054 aaKnown RBP18.39■□□□□ 0.53
ATG4B-209ENST00000425239 EAF2Q96CJ1 260 aaPredicted RBP18.39■□□□□ 0.53
ATG4B-209ENST00000425239 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.39■□□□□ 0.539e-8■■■□□ 15.9
ATG4B-209ENST00000425239 AS3MTQ9HBK9 375 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 TLR7Q9NYK1 1049 aaKnown RBP18.39■□□□□ 0.53
ATG4B-209ENST00000425239 NR2E3Q9Y5X4 410 aa18.39■□□□□ 0.53
ATG4B-209ENST00000425239 SURF6O75683 361 aaKnown RBP18.38■□□□□ 0.53
ATG4B-209ENST00000425239 RLBP1P12271 317 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 PLCG2P16885 1265 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 DYNLL1P63167 89 aaKnown RBP18.38■□□□□ 0.53
ATG4B-209ENST00000425239 Q3C1V9 767 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 MAP3K21Q5TCX8 1036 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 USP6NLQ92738 828 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 EMILIN3Q9NT22 766 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 A0A0C4DFX4 3053 aa18.38■□□□□ 0.53
ATG4B-209ENST00000425239 C19orf81C9J6K1 198 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 HMGCRP04035 888 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 TRIB2Q92519 343 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 GINM1Q9NU53 330 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 TAOK2Q9UL54 1235 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 RPTORQ8N122 1335 aa18.37■□□□□ 0.53
ATG4B-209ENST00000425239 LAMA2P24043 3122 aaKnown RBP18.37■□□□□ 0.53
ATG4B-209ENST00000425239 USP17L10C9JJH3 530 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 EVI5O60447 810 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 GDF11O95390 407 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 HERVK_113P62684 666 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 TATDN1Q6P1N9 297 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 ANKLE1Q8NAG6 615 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 CCDC8Q9H0W5 538 aaPredicted RBP18.36■□□□□ 0.53
ATG4B-209ENST00000425239 ZBTB21Q9ULJ3 1066 aa18.36■□□□□ 0.53
ATG4B-209ENST00000425239 A0A1W2PPC1 479 aa18.35■□□□□ 0.53
ATG4B-209ENST00000425239 SOX1O00570 391 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-209ENST00000425239 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
ATG4B-209ENST00000425239 NECAB2Q7Z6G3 386 aa18.35■□□□□ 0.53
ATG4B-209ENST00000425239 NOL10Q9BSC4 688 aaKnown RBP18.35■□□□□ 0.53
ATG4B-209ENST00000425239 HMX1Q9NP08 348 aaPredicted RBP18.35■□□□□ 0.53
ATG4B-209ENST00000425239 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
ATG4B-209ENST00000425239 OGDHLQ9ULD0 1010 aa18.35■□□□□ 0.53
ATG4B-209ENST00000425239 GPRC5AQ8NFJ5 357 aa18.34■□□□□ 0.53
ATG4B-209ENST00000425239 GDF15Q99988 308 aa18.34■□□□□ 0.53
ATG4B-209ENST00000425239 PORCNQ9H237 461 aa18.34■□□□□ 0.53
ATG4B-209ENST00000425239 ANTXR1Q9H6X2 564 aa18.34■□□□□ 0.53
ATG4B-209ENST00000425239 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
ATG4B-209ENST00000425239 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
ATG4B-209ENST00000425239 CYP2B6P20813 491 aa18.33■□□□□ 0.52
ATG4B-209ENST00000425239 CYP7A1P22680 504 aa18.33■□□□□ 0.52
ATG4B-209ENST00000425239 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
ATG4B-209ENST00000425239 MORN1Q5T089 497 aa18.33■□□□□ 0.52
ATG4B-209ENST00000425239 TMOD4Q9NZQ9 345 aa18.33■□□□□ 0.52
ATG4B-209ENST00000425239 MYH1P12882 1939 aa18.33■□□□□ 0.52
ATG4B-209ENST00000425239 CNMDO75829 334 aa18.32■□□□□ 0.52
ATG4B-209ENST00000425239 ERVK-9P63128 1117 aa18.32■□□□□ 0.52
ATG4B-209ENST00000425239 ERVK-24P63145 666 aa18.32■□□□□ 0.52
ATG4B-209ENST00000425239 CRACR2BQ8N4Y2 399 aaPredicted RBP18.32■□□□□ 0.52
ATG4B-209ENST00000425239 C12orf42Q96LP6 360 aa18.32■□□□□ 0.52
ATG4B-209ENST00000425239 GH2P01242 217 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 BMP8BP34820 402 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 CACNB2Q08289 660 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-209ENST00000425239 OS9Q13438 667 aaPredicted RBP18.31■□□□□ 0.52
ATG4B-209ENST00000425239 LHX8Q68G74 356 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 CEP85Q6P2H3 762 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 MIGA1Q8NAN2 632 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 NUDT12Q9BQG2 462 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 RIOK1Q9BRS2 568 aaKnown RBP18.31■□□□□ 0.52
ATG4B-209ENST00000425239 EHD4Q9H223 541 aa18.31■□□□□ 0.52
ATG4B-209ENST00000425239 DDX60LQ5H9U9 1706 aaKnown RBP18.31■□□□□ 0.52
ATG4B-209ENST00000425239 PFASO15067 1338 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 COL6A1P12109 1028 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 PRKAR2AP13861 404 aaKnown RBP18.3■□□□□ 0.52
ATG4B-209ENST00000425239 MAPK4P31152 587 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 GUCY1A2P33402 732 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 PLCD1P51178 756 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 CCL14Q16627 93 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 USP17L2Q6R6M4 530 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 GPR142Q7Z601 462 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 MAGEB6Q8N7X4 407 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
ATG4B-209ENST00000425239 IDH1O75874 414 aaKnown RBP18.29■□□□□ 0.52
ATG4B-209ENST00000425239 IGHA2P01877 340 aa18.29■□□□□ 0.52
ATG4B-209ENST00000425239 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
ATG4B-209ENST00000425239 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
ATG4B-209ENST00000425239 LRCH3Q96II8 777 aa18.29■□□□□ 0.52
ATG4B-209ENST00000425239 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 SHMT1P34896 483 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 EVX2Q03828 476 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 GABPAQ06546 454 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 LBX2Q6XYB7 198 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 ACER1Q8TDN7 264 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 KIAA1683Q9H0B3 1180 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 C11orf49Q9H6J7 331 aa18.28■□□□□ 0.52
ATG4B-209ENST00000425239 SERPINB13Q9UIV8 391 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms