RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 TRIM37O94972 964 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 MAP4K4O95819 1239 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 TAGLNQ01995 201 aaKnown RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 RAD51AP2Q09MP3 1159 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 MRPL58Q14197 206 aaKnown RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 ZNF574Q6ZN55 896 aaPredicted RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 PLD6Q8N2A8 252 aaKnown RBP4.94□□□□□ -1.62
SF3B1-205ENST00000424674 FAM181AQ8N9Y4 354 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 NETO1Q8TDF5 533 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 ANKRD24Q8TF21 1146 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 DUSP23Q9BVJ7 150 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 OSBPL7Q9BZF2 842 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 TGIF2Q9GZN2 237 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 CACNA2D2Q9NY47 1150 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 TERF2IPQ9NYB0 399 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 CHPF2Q9P2E5 772 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 FAN1Q9Y2M0 1017 aa4.94□□□□□ -1.62
SF3B1-205ENST00000424674 CREB3O43889 395 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 PAGE1O75459 146 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 LEFTY1O75610 366 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 CEACAM5P06731 702 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 BMP6P22004 513 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 HSD3B2P26439 372 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 PLCL1Q15111 1095 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 LLGL2Q6P1M3 1020 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 ARHGAP27Q6ZUM4 889 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.93□□□□□ -1.62
SF3B1-205ENST00000424674 NLGN1Q8N2Q7 840 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 TOP6BLQ8N6T0 577 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 CCDC136Q96JN2 1154 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 C12orf49Q9H741 205 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 ZSWIM4Q9H7M6 989 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 MKNK2Q9HBH9 465 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 FAM8A1Q9UBU6 413 aa4.93□□□□□ -1.62
SF3B1-205ENST00000424674 LAS1LQ9Y4W2 734 aaKnown RBP4.93□□□□□ -1.62
SF3B1-205ENST00000424674 U2SURPO15042 1029 aaKnown RBP4.92□□□□□ -1.62
SF3B1-205ENST00000424674 LDHBP07195 334 aaKnown RBP4.92□□□□□ -1.62
SF3B1-205ENST00000424674 USP17L7P0C7H9 530 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 JUNBP17275 347 aaPredicted RBP4.92□□□□□ -1.62
SF3B1-205ENST00000424674 ITGB5P18084 799 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 LRRC14Q15048 493 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 IFI16Q16666 785 aaKnown RBP4.92□□□□□ -1.62
SF3B1-205ENST00000424674 LONRF3Q496Y0 759 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 PPM1JQ5JR12 505 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 MPRIPQ6WCQ1 1025 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 NT5DC4Q86YG4 428 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 GRIN3AQ8TCU5 1115 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 PIF1Q9H611 641 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 CAPN10Q9HC96 672 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 PICK1Q9NRD5 415 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 METTL5Q9NRN9 209 aaKnown RBP4.92□□□□□ -1.62
SF3B1-205ENST00000424674 CSADQ9Y600 493 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 U3KQE9 123 aa4.92□□□□□ -1.62
SF3B1-205ENST00000424674 DCDC2CA8MYV0 355 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 CELA3AP09093 270 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 NTF4P34130 210 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 OXCT1P55809 520 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 PRKCQQ04759 706 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 RBL2Q08999 1139 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 TCEAL1Q15170 157 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 RASIP1Q5U651 963 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 C9orf131Q5VYM1 1079 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 PCNX4Q63HM2 1172 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 SCARA3Q6AZY7 606 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 ZNF746Q6NUN9 644 aaPredicted RBP4.91□□□□□ -1.62
SF3B1-205ENST00000424674 SPRED2Q7Z698 418 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 GPATCH11Q8N954 259 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 PMFBP1Q8TBY8 1022 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 ASIC4Q96FT7 647 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 FAM161BQ96MY7 647 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 GMLQ99445 158 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 OSBPL2Q9H1P3 480 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 TMX1Q9H3N1 280 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 PCDHA4Q9UN74 947 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 COL4A3BPQ9Y5P4 624 aa4.91□□□□□ -1.62
SF3B1-205ENST00000424674 FANCGO15287 622 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 CD8BP10966 210 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 FUT4P22083 530 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 RING1Q06587 406 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 BNIP3Q12983 259 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 FAM50AQ14320 339 aaKnown RBP4.9□□□□□ -1.63
SF3B1-205ENST00000424674 NFE2L2Q16236 605 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 ZNF792Q3KQV3 632 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 ZBTB37Q5TC79 503 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 UBE3DQ7Z6J8 389 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 METTL16Q86W50 562 aaKnown RBP4.9□□□□□ -1.63
SF3B1-205ENST00000424674 C12orf40Q86WS4 652 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 CCDC146Q8IYE0 955 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 TMTC2Q8N394 836 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 KCT2Q8NC54 265 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 PMM1Q92871 262 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 RNF34Q969K3 372 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 ELMO3Q96BJ8 720 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 HRASLS5Q96KN8 279 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 NAP1L5Q96NT1 182 aaPredicted RBP4.9□□□□□ -1.63
SF3B1-205ENST00000424674 DUSP9Q99956 384 aaKnown RBP4.9□□□□□ -1.63
SF3B1-205ENST00000424674 PRDM10Q9NQV6 1147 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 VAV3Q9UKW4 847 aa4.9□□□□□ -1.63
SF3B1-205ENST00000424674 CYP8B1Q9UNU6 501 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms