RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, human

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR1A-204	ENST00000424089	GPR25	O00155	361 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	JAK2	O60674	1132 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	USP17L8	P0C7I0	530 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	CYP7A1	P22680	504 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	HIBADH	P31937	336 aa	Known RBP	11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	RCAN1	P53805	252 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	AKNAD1	Q5T1N1	836 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	MFSD6	Q6ZSS7	791 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	C15orf52	Q6ZUT6	534 aa	Known RBP	11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	SGMS1	Q86VZ5	419 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	MYOZ2	Q9NPC6	264 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	ANAPC4	Q9UJX5	808 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	SLC4A4	Q9Y6R1	1079 aa		11.71	□□□□□ -0.53
POLR1A-204	ENST00000424089	MAGEB6P1	A0A0J9YX57	407 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	KLF18	A0A0U1RQI7	1052 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	SNAP23	O00161	211 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	SH2B2	O14492	632 aa	Predicted RBP	11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	CPLX1	O14810	134 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	FIBP	O43427	364 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	FKTN	O75072	461 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	CTDNEP1	O95476	244 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	GYG1	P46976	350 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	TM4SF4	P48230	202 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	NASP	P49321	788 aa	Predicted RBP	11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	ANTXR2	P58335	489 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	CCDC173	Q0VFZ6	552 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	REST	Q13127	1097 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	SART3	Q15020	963 aa	Known RBP	11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	STAG1	Q8WVM7	1258 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	ZNF396	Q96N95	335 aa	Predicted RBP	11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	ARMT1	Q9H993	441 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	RAI14	Q9P0K7	980 aa		11.7	□□□□□ -0.54
POLR1A-204	ENST00000424089	GOLGA6L4	A6NEF3	574 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	GOLGA8B	A8MQT2	603 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	UBE2Q2L	H0YL09	131 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	GADD45B	O75293	160 aa	Predicted RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	TDO2	P48775	406 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	CCT2	P78371	535 aa	Known RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	PPP2R5B	Q15173	497 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	SYNE3	Q6ZMZ3	975 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	CERS3	Q8IU89	383 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	TBC1D10C	Q8IV04	446 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	OGFOD1	Q8N543	542 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	IGDCC4	Q8TDY8	1250 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	CHAMP1	Q96JM3	812 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	SPATA32	Q96LK8	384 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	NBPF3	Q9H094	633 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	TSPY26P	Q9H489	355 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	GDPD2	Q9HCC8	539 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	RBM27	Q9P2N5	1060 aa	Known RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	BRPF3	Q9ULD4	1205 aa		11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.69	□□□□□ -0.54
POLR1A-204	ENST00000424089	MYH7	P12883	1935 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	DOCK2	Q92608	1830 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	SYCE3	A1L190	88 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	USP17L3	A6NCW0	530 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	USP17L4	A6NCW7	530 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	ALDH1A1	P00352	501 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	UVSSA	Q2YD98	709 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	MOB2	Q70IA6	237 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	CHST3	Q7LGC8	479 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	USP17L1	Q7RTZ2	530 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	ARMC9	Q7Z3E5	817 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	PODN	Q7Z5L7	613 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	LCORL	Q8N3X6	602 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	WDR66	Q8TBY9	1149 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	DDX11	Q96FC9	970 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	PPP1R9B	Q96SB3	815 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	RIOK1	Q9BRS2	568 aa	Known RBP	11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	ABCF2	Q9UG63	623 aa		11.68	□□□□□ -0.54
POLR1A-204	ENST00000424089	NID2	Q14112	1375 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	XDH	P47989	1333 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	CCDC196	A0A1B0GTZ2	297 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	ERICH2	A1L162	156 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	ZBTB43	O43298	467 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	ATP2B4	P23634	1241 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	METAP2	P50579	478 aa	Known RBP eCLIP	11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	MKRN3	Q13064	507 aa	Known RBP	11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	TMEM67	Q5HYA8	995 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	BRAP	Q7Z569	592 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	TTC6	Q86TZ1	520 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	FERMT3	Q86UX7	667 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	SLC17A8	Q8NDX2	589 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	LEO1	Q8WVC0	666 aa	Predicted RBP	11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	WASF1	Q92558	559 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	CFHR5	Q9BXR6	569 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	ATP8A2	Q9NTI2	1148 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	DDX19A	Q9NUU7	478 aa	Known RBP	11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	RCOR1	Q9UKL0	485 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	COL4A1	P02462	1669 aa		11.67	□□□□□ -0.54
POLR1A-204	ENST00000424089	MYO3B	Q8WXR4	1341 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	POTEF	A5A3E0	1075 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	CCDC69	A6NI79	296 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089		B4E1Z4	1266 aa		11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	IFIT3	O14879	490 aa	Known RBP	11.66	□□□□□ -0.54
POLR1A-204	ENST00000424089	SLC3A2	P08195	630 aa	Known RBP	11.66	□□□□□ -0.54

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