RNA–Protein interactions for RNA: ENST00000423698.6

ERCC1-204, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2 BASIC

Gene ERCC1, Length 3,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-204ENST00000423698 MARCH10Q8NA82 808 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-204ENST00000423698 UIMC1Q96RL1 719 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 ZSWIM4Q9H7M6 989 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 RFX7Q2KHR2 1363 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-204ENST00000423698 DESI2Q9BSY9 194 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
ERCC1-204ENST00000423698 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.48□□□□□ -0.25
ERCC1-204ENST00000423698 YEATS4O95619 227 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 BMP6P22004 513 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 CMA1P23946 247 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 NLRP12P59046 1061 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 AKAP17AQ02040 695 aaKnown RBP13.47□□□□□ -0.25
ERCC1-204ENST00000423698 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
ERCC1-204ENST00000423698 SAFBQ15424 915 aaKnown RBP eCLIP13.47□□□□□ -0.25
ERCC1-204ENST00000423698 RASGRP2Q7LDG7 609 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 TRIM22Q8IYM9 498 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 CCAR2Q8N163 923 aaKnown RBP13.47□□□□□ -0.25
ERCC1-204ENST00000423698 ERO1AQ96HE7 468 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 NACAP1Q9BZK3 213 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 TNKSO95271 1327 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 GLI3P10071 1580 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 LOC102724159A0A0B4J2E5 919 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 UQCRFS1P1P0C7P4 283 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 PWP2Q15269 919 aaKnown RBP13.47□□□□□ -0.25
ERCC1-204ENST00000423698 CCDC152Q4G0S7 254 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 ZNF654Q8IZM8 581 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 DNAI1Q9UI46 699 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 NWD2Q9ULI1 1742 aa13.47□□□□□ -0.25
ERCC1-204ENST00000423698 USP17L12C9JPN9 530 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 USP17L21D6R901 530 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 CDKL5O76039 1030 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 FMR1Q06787 632 aaKnown RBP eCLIP13.46□□□□□ -0.25
ERCC1-204ENST00000423698 PPARAQ07869 468 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 NCAPHQ15003 741 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 PTPAQ15257 358 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 NOSTRINQ8IVI9 506 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 RASGRP4Q8TDF6 673 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 MRFAP1L1Q96HT8 127 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
ERCC1-204ENST00000423698 TJP1Q07157 1748 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 MAGEB6P1A0A0J9YX57 407 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 SYCP1Q15431 976 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
ERCC1-204ENST00000423698 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.46□□□□□ -0.25
ERCC1-204ENST00000423698 PLA2G12BQ9BX93 195 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 CSRNP2Q9H175 543 aa13.46□□□□□ -0.25
ERCC1-204ENST00000423698 MYCNP04198 464 aaPredicted RBP13.46□□□□□ -0.26
ERCC1-204ENST00000423698 PRDX5P30044 214 aa13.46□□□□□ -0.26
ERCC1-204ENST00000423698 OLFM4Q6UX06 510 aa13.46□□□□□ -0.26
ERCC1-204ENST00000423698 SHISA4Q96DD7 197 aa13.46□□□□□ -0.26
ERCC1-204ENST00000423698 MAP3K14Q99558 947 aa13.46□□□□□ -0.26
ERCC1-204ENST00000423698 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 PARP4Q9UKK3 1724 aaKnown RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 A0A1W2PQ27 194 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 A0A1W2PQ64 194 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 A0A1W2PQD8 194 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 PES1O00541 588 aaKnown RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 FGFR2P21802 821 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 ARID4AP29374 1257 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 EIF5P55010 431 aaKnown RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 SART3Q15020 963 aaKnown RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 TXNRD3Q86VQ6 643 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 FANCBQ8NB91 859 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 EVCP57679 992 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 KARSQ15046 597 aaKnown RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.45□□□□□ -0.26
ERCC1-204ENST00000423698 GPATCH11Q8N954 259 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 TSPYL1Q9H0U9 437 aa13.45□□□□□ -0.26
ERCC1-204ENST00000423698 A0A0U1RQJ8 604 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 LMAN1P49257 510 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 TPM4P67936 248 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 KRI1Q8N9T8 703 aaKnown RBP13.44□□□□□ -0.26
ERCC1-204ENST00000423698 ATRIPQ8WXE1 791 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 ERCC3P19447 782 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 CEP120Q8N960 986 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 GPKOWQ92917 476 aaPredicted RBP eCLIP13.44□□□□□ -0.26
ERCC1-204ENST00000423698 PPP1R13BQ96KQ4 1090 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 C8orf37Q96NL8 207 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-204ENST00000423698 HSD3B7Q9H2F3 369 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 NFE2L3Q9Y4A8 694 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 TAF1P21675 1872 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 MYO1CO00159 1063 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 URI1O94763 535 aaPredicted RBP13.44□□□□□ -0.26
ERCC1-204ENST00000423698 MCM7P33993 719 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 IFIT1BQ5T764 474 aaKnown RBP13.44□□□□□ -0.26
ERCC1-204ENST00000423698 NYAP1Q6ZVC0 841 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 ANKRD18AQ8IVF6 992 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 TMEM87BQ96K49 555 aa13.44□□□□□ -0.26
ERCC1-204ENST00000423698 CDHR2Q9BYE9 1310 aa13.43□□□□□ -0.26
ERCC1-204ENST00000423698 BCL9O00512 1426 aa13.43□□□□□ -0.26
ERCC1-204ENST00000423698 PCNTO95613 3336 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms