RNA–Protein interactions for RNA: ENST00000422593.5

NICN1-202, Transcript of nicolin 1, humanhuman

TSL 3

Gene NICN1, Length 742 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1-202ENST00000422593 HMX1Q9NP08 348 aaPredicted RBP16.17■□□□□ 0.18
NICN1-202ENST00000422593 SAP30BPQ9UHR5 308 aaKnown RBP16.17■□□□□ 0.18
NICN1-202ENST00000422593 C19orf81C9J6K1 198 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 CYP2B6P20813 491 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 TRIM32Q13049 653 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 SSH3Q8TE77 659 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 DIS3LQ8TF46 1054 aaKnown RBP16.16■□□□□ 0.18
NICN1-202ENST00000422593 C1orf115Q9H7X2 142 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 DDX60LQ5H9U9 1706 aaKnown RBP16.16■□□□□ 0.18
NICN1-202ENST00000422593 FLT1P17948 1338 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
NICN1-202ENST00000422593 USP17L10C9JJH3 530 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 PEX10O60683 326 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 HLA-DOAP06340 250 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 HOXA7P31268 230 aaPredicted RBP16.15■□□□□ 0.18
NICN1-202ENST00000422593 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
NICN1-202ENST00000422593 SHROOM1Q2M3G4 852 aaPredicted RBP16.15■□□□□ 0.18
NICN1-202ENST00000422593 GPRC5AQ8NFJ5 357 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 CCDC8Q9H0W5 538 aaPredicted RBP16.15■□□□□ 0.18
NICN1-202ENST00000422593 PRO3102Q9H379 93 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 DNAJC18Q9H819 358 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 PIH1D3Q9NQM4 214 aaKnown RBP16.15■□□□□ 0.18
NICN1-202ENST00000422593 MORF4L1Q9UBU8 362 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
NICN1-202ENST00000422593 CYP7A1P22680 504 aa16.14■□□□□ 0.17
NICN1-202ENST00000422593 HERVK_113P62684 666 aa16.14■□□□□ 0.17
NICN1-202ENST00000422593 METTL16Q86W50 562 aaKnown RBP16.14■□□□□ 0.17
NICN1-202ENST00000422593 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
NICN1-202ENST00000422593 ANKLE1Q8NAG6 615 aa16.14■□□□□ 0.17
NICN1-202ENST00000422593 NUDT12Q9BQG2 462 aa16.14■□□□□ 0.17
NICN1-202ENST00000422593 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 IDH1O75874 414 aaKnown RBP16.13■□□□□ 0.17
NICN1-202ENST00000422593 Q3C1V9 767 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 FTSJ3Q8IY81 847 aaKnown RBP16.13■□□□□ 0.17
NICN1-202ENST00000422593 C7orf61Q8IZ16 206 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 TRIB2Q92519 343 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 ZNF512BQ96KM6 892 aaPredicted RBP16.13■□□□□ 0.17
NICN1-202ENST00000422593 TXNRD2Q9NNW7 524 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 GINM1Q9NU53 330 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 ZBTB21Q9ULJ3 1066 aa16.13■□□□□ 0.17
NICN1-202ENST00000422593 USP5P45974 858 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 USP17L2Q6R6M4 530 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 PAGR1Q9BTK6 254 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 NBPF3Q9H094 633 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 TLR7Q9NYK1 1049 aaKnown RBP16.12■□□□□ 0.17
NICN1-202ENST00000422593 RBPJLQ9UBG7 517 aa16.12■□□□□ 0.17
NICN1-202ENST00000422593 DBNLQ9UJU6 430 aaKnown RBP16.12■□□□□ 0.17
NICN1-202ENST00000422593 IGSF3O75054 1194 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 MAPK4P31152 587 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 PDE3AQ14432 1141 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 ZYXQ15942 572 aaKnown RBP16.11■□□□□ 0.17
NICN1-202ENST00000422593 MAGEB6Q8N7X4 407 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 MIGA1Q8NAN2 632 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 EAF2Q96CJ1 260 aaPredicted RBP16.11■□□□□ 0.17
NICN1-202ENST00000422593 CWC22Q9HCG8 908 aaKnown RBP16.11■□□□□ 0.17
NICN1-202ENST00000422593 EMILIN3Q9NT22 766 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 ZMYND8Q9ULU4 1186 aaPredicted RBP16.11■□□□□ 0.17
NICN1-202ENST00000422593 NOP58Q9Y2X3 529 aaKnown RBP16.11■□□□□ 0.17
NICN1-202ENST00000422593 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 MYH8P13535 1937 aa16.11■□□□□ 0.17
NICN1-202ENST00000422593 A0A1W2PPC1 479 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 GH2P01242 217 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 PRKAR2AP13861 404 aaKnown RBP16.1■□□□□ 0.17
NICN1-202ENST00000422593 ERVK-9P63128 1117 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 ERVK-24P63145 666 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 SOCS4Q8WXH5 440 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
NICN1-202ENST00000422593 XRCC5P13010 732 aaKnown RBP16.09■□□□□ 0.17
NICN1-202ENST00000422593 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
NICN1-202ENST00000422593 GPR142Q7Z601 462 aa16.09■□□□□ 0.17
NICN1-202ENST00000422593 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
NICN1-202ENST00000422593 TRMT44Q8IYL2 757 aaKnown RBP16.09■□□□□ 0.17
NICN1-202ENST00000422593 GTF3C2Q8WUA4 911 aaPredicted RBP16.09■□□□□ 0.17
NICN1-202ENST00000422593 FEZ1Q99689 392 aa16.09■□□□□ 0.17
NICN1-202ENST00000422593 PORCNQ9H237 461 aa16.09■□□□□ 0.17
NICN1-202ENST00000422593 OGDHLQ9ULD0 1010 aa16.09■□□□□ 0.17
NICN1-202ENST00000422593 RANBP2P49792 3224 aaKnown RBP16.08■□□□□ 0.17
NICN1-202ENST00000422593 NAV1Q8NEY1 1877 aa16.08■□□□□ 0.17
NICN1-202ENST00000422593 SOX1O00570 391 aaPredicted RBP16.08■□□□□ 0.16
NICN1-202ENST00000422593 ZKSCAN1P17029 563 aaPredicted RBP16.08■□□□□ 0.16
NICN1-202ENST00000422593 SYN1P17600 705 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 RGS2P41220 211 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
NICN1-202ENST00000422593 MAP3K12Q12852 859 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 RAB3GAP1Q15042 981 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 CERKLQ49MI3 558 aaPredicted RBP16.08■□□□□ 0.16
NICN1-202ENST00000422593 MAP3K21Q5TCX8 1036 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 TATDN1Q6P1N9 297 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 TTC6Q86TZ1 520 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 LRCH3Q96II8 777 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 ANTXR1Q9H6X2 564 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 SERPINB13Q9UIV8 391 aa16.08■□□□□ 0.16
NICN1-202ENST00000422593 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
NICN1-202ENST00000422593 USP17L15C9J2P7 530 aa16.07■□□□□ 0.16
NICN1-202ENST00000422593 USP17L13C9JLJ4 530 aa16.07■□□□□ 0.16
NICN1-202ENST00000422593 USP17L11C9JVI0 530 aa16.07■□□□□ 0.16
NICN1-202ENST00000422593 USP17L18D6R9N7 530 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms