RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 ESYT1Q9BSJ8 1104 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 ELP3Q9H9T3 547 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 CSADQ9Y600 493 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 RAD50Q92878 1312 aa11.06□□□□□ -0.64
PDGFC-202ENST00000422544 MYH7P12883 1935 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 UNCXA6NJT0 531 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 CTNND1O60716 968 aaKnown RBP11.05□□□□□ -0.64
PDGFC-202ENST00000422544 SHMT1P34896 483 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 CDK8P49336 464 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 PTH1RQ03431 593 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 PPARAQ07869 468 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 TATDN1Q6P1N9 297 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 DSCC1Q9BVC3 393 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 SNCAIPQ9Y6H5 919 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 A0A0C4DFX4 3053 aa11.05□□□□□ -0.64
PDGFC-202ENST00000422544 FAM155AB1AL88 458 aaPredicted RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 GDF11O95390 407 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 CAP2P40123 477 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 HAND2P61296 217 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 JAG1P78504 1218 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 CTDSPL2Q05D32 466 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 MKRN3Q13064 507 aaKnown RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 SHROOM1Q2M3G4 852 aaPredicted RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 CERKLQ49MI3 558 aaPredicted RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 NOL9Q5SY16 702 aaKnown RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 C16orf86Q6ZW13 317 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 SCYL3Q8IZE3 742 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 CCDC102AQ96A19 550 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 INCENPQ9NQS7 918 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 PICK1Q9NRD5 415 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 SWAP70Q9UH65 585 aa11.04□□□□□ -0.64
PDGFC-202ENST00000422544 RANBP2P49792 3224 aaKnown RBP11.04□□□□□ -0.64
PDGFC-202ENST00000422544 AK9Q5TCS8 1911 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 ZNF213O14771 459 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 PRDM1O75626 825 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 SLC3A2P08195 630 aaKnown RBP11.03□□□□□ -0.64
PDGFC-202ENST00000422544 SLC10A3P09131 477 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 MAP2K2P36507 400 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 CCDC84Q86UT8 332 aaPredicted RBP11.03□□□□□ -0.64
PDGFC-202ENST00000422544 OPTNQ96CV9 577 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 LSG1Q9H089 658 aaKnown RBP11.03□□□□□ -0.64
PDGFC-202ENST00000422544 MKNK2Q9HBH9 465 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 ANO2Q9NQ90 1003 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
PDGFC-202ENST00000422544 SPDYE5A6NIY4 337 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 MPHOSPH10O00566 681 aaKnown RBP11.02□□□□□ -0.65
PDGFC-202ENST00000422544 GH2P01242 217 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 AKR1B1P15121 316 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 PTPRAP18433 802 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 GJA5P36382 358 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ECE1P42892 770 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ABCB5Q2M3G0 1257 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ERO1BQ86YB8 467 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
PDGFC-202ENST00000422544 MAP4K1Q92918 833 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 OTUD5Q96G74 571 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 WNK4Q96J92 1243 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ANAPC4Q9UJX5 808 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 TACC3Q9Y6A5 838 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ZHX2Q9Y6X8 837 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 ZMYM6O95789 1325 aa11.02□□□□□ -0.65
PDGFC-202ENST00000422544 CEP290O15078 2479 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 COL6A3P12111 3177 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 IRF6O14896 467 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 ASNSP08243 561 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 RASA1P20936 1047 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 PPATQ06203 517 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 PDE4BQ07343 736 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 DGKZQ13574 1117 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 RAB3GAP1Q15042 981 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 IMMTQ16891 758 aaKnown RBP11.01□□□□□ -0.65
PDGFC-202ENST00000422544 TBC1D10CQ8IV04 446 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 ZNF287Q9HBT7 754 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 CABP5Q9NP86 173 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 RBM8AQ9Y5S9 174 aaKnown RBP11.01□□□□□ -0.65
PDGFC-202ENST00000422544 CDK5RAP2Q96SN8 1893 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 ROBO3Q96MS0 1386 aa11.01□□□□□ -0.65
PDGFC-202ENST00000422544 FOCADQ5VW36 1801 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 MYH1P12882 1939 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 USP17L5A8MUK1 530 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 GUCY1A2P33402 732 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 SOX10P56693 466 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 KIF23Q02241 960 aaPredicted RBP11□□□□□ -0.65
PDGFC-202ENST00000422544 NOGQ13253 232 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 PPIL2Q13356 520 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 SEPT2Q15019 361 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 FAM47AQ5JRC9 791 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 RRP12Q5JTH9 1297 aaKnown RBP11□□□□□ -0.65
PDGFC-202ENST00000422544 AKNAD1Q5T1N1 836 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 MFSD6Q6ZSS7 791 aa11□□□□□ -0.65
PDGFC-202ENST00000422544 CCDC17Q96LX7 622 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms