RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 ATG9AQ7Z3C6 839 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 CEP126Q9P2H0 1117 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 RABGAP1Q9Y3P9 1069 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 RLFQ13129 1914 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 SYNGAP1Q96PV0 1343 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 ASNSP08243 561 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 USP17L2Q6R6M4 530 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 CCDC84Q86UT8 332 aaPredicted RBP8.26□□□□□ -1.09
PMS1-208ENST00000421722 CUL9Q8IWT3 2517 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
PMS1-208ENST00000421722 IGSF3O75054 1194 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 PTPREP23469 700 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 PICALMQ13492 652 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 CCL14Q16627 93 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 C9orf50Q5SZB4 431 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 ERICH6Q7L0X2 663 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 METTL16Q86W50 562 aaKnown RBP8.26□□□□□ -1.09
PMS1-208ENST00000421722 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 DHX36Q9H2U1 1008 aaKnown RBP8.26□□□□□ -1.09
PMS1-208ENST00000421722 CWC22Q9HCG8 908 aaKnown RBP8.26□□□□□ -1.09
PMS1-208ENST00000421722 TXNRD2Q9NNW7 524 aa8.26□□□□□ -1.09
PMS1-208ENST00000421722 PTPRCP08575 1304 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 KBTBD13C9JR72 458 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 IL15P40933 162 aaPredicted RBP8.25□□□□□ -1.09
PMS1-208ENST00000421722 ATP2B2Q01814 1243 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 OLFML2BQ68BL8 750 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 LBX2Q6XYB7 198 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 FOXP4Q8IVH2 680 aaPredicted RBP8.25□□□□□ -1.09
PMS1-208ENST00000421722 BADQ92934 168 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 PDLIM7Q9NR12 457 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.25□□□□□ -1.09
PMS1-208ENST00000421722 HDAC5Q9UQL6 1122 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
PMS1-208ENST00000421722 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.24□□□□□ -1.09
PMS1-208ENST00000421722 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L10C9JJH3 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 PHKA1P46020 1223 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 MTMR2Q13614 643 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 RRP1BQ14684 758 aaKnown RBP8.24□□□□□ -1.09
PMS1-208ENST00000421722 Q3C1V9 767 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 KLHDC4Q8TBB5 520 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 PORCNQ9H237 461 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 PI4KBQ9UBF8 816 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L15C9J2P7 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L13C9JLJ4 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L11C9JVI0 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L18D6R9N7 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L22D6RA61 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L17D6RBQ6 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L19D6RCP7 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L20D6RJB6 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 KIAA0355O15063 1070 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 CNMDO75829 334 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 CYBAP13498 195 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 USP17L24Q0WX57 530 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 GRB14Q14449 540 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 CCDC102BQ68D86 513 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 ASB2Q96Q27 587 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 C1QTNF1Q9BXJ1 281 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 NRBP1Q9UHY1 535 aa8.24□□□□□ -1.09
PMS1-208ENST00000421722 PLCG2P16885 1265 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 ATN1P54259 1190 aaPredicted RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 MRPS5P82675 430 aaKnown RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 MECOMQ03112 1051 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 CCDC174Q6PII3 467 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 RNPC3Q96LT9 517 aaKnown RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 USP44Q9H0E7 712 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 FLRT1Q9NZU1 646 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 THEGQ9P2T0 379 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 TACC3Q9Y6A5 838 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 SLURP2P0DP57 97 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 MAP3K12Q12852 859 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 MVPQ14764 893 aaKnown RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 TRIM60Q495X7 471 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 MRPL50Q8N5N7 158 aaKnown RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 TRPV1Q8NER1 839 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 GAS2L1Q99501 681 aaPredicted RBP8.23□□□□□ -1.09
PMS1-208ENST00000421722 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 PHF24Q9UPV7 400 aa8.23□□□□□ -1.09
PMS1-208ENST00000421722 SIPA1L1O43166 1804 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 TRIM43BA6NCK2 446 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 SEPT4O43236 478 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 USP14P54578 494 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 RASGRF1Q13972 1273 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 TEX11Q8IYF3 940 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 USP38Q8NB14 1042 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 SHCBP1Q8NEM2 672 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 TRIM43Q96BQ3 446 aaPredicted RBP8.22□□□□□ -1.09
PMS1-208ENST00000421722 NOL10Q9BSC4 688 aaKnown RBP8.22□□□□□ -1.09
PMS1-208ENST00000421722 PRDM5Q9NQX1 630 aaPredicted RBP8.22□□□□□ -1.09
PMS1-208ENST00000421722 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 SLC5A4Q9NY91 659 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 ABCF2Q9UG63 623 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 AKAP2Q9Y2D5 859 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 IVNS1ABPQ9Y6Y0 642 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 FAM196BA6NMK8 535 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 STRNO43815 780 aa8.22□□□□□ -1.09
PMS1-208ENST00000421722 CLTBP09497 229 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms