RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 CCAR1Q8IX12 1150 aaKnown RBP7.15□□□□□ -1.26
HDAC8-212ENST00000421523 GJD3Q8N144 294 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 HLA-CQ95604 372 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 PLA2G12BQ9BX93 195 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 ASCC2Q9H1I8 757 aaPredicted RBP7.15□□□□□ -1.26
HDAC8-212ENST00000421523 CWC22Q9HCG8 908 aaKnown RBP7.15□□□□□ -1.26
HDAC8-212ENST00000421523 FAM86C1Q9NVL1 165 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 COG5Q9UP83 839 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 IQSEC3Q9UPP2 1182 aaPredicted RBP7.15□□□□□ -1.26
HDAC8-212ENST00000421523 YBX2Q9Y2T7 364 aaKnown RBP7.15□□□□□ -1.26
HDAC8-212ENST00000421523 TACC3Q9Y6A5 838 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 IL16Q14005 1332 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 FRYLO94915 3013 aa7.15□□□□□ -1.27
HDAC8-212ENST00000421523 DOCK1Q14185 1865 aa7.15□□□□□ -1.27
HDAC8-212ENST00000421523 PTPRZ1P23471 2315 aaPredicted RBP7.15□□□□□ -1.27
HDAC8-212ENST00000421523 LOC285556D6RIA3 1793 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 APBB1O00213 710 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 RFXAPO00287 272 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 KIAA0355O15063 1070 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 GTPBP6O43824 516 aaPredicted RBP7.14□□□□□ -1.27
HDAC8-212ENST00000421523 MSCO60682 206 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 VAMP4O75379 141 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 DDX58O95786 925 aaKnown RBP7.14□□□□□ -1.27
HDAC8-212ENST00000421523 CSF1RP07333 972 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 ALADP13716 330 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 GYG1P46976 350 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 NFIAQ12857 509 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 CWF19L2Q2TBE0 894 aaKnown RBP7.14□□□□□ -1.27
HDAC8-212ENST00000421523 FKBP1CQ5VVH2 108 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 MFSD14CQ5VZR4 134 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 APOBEC3HQ6NTF7 200 aaKnown RBP7.14□□□□□ -1.27
HDAC8-212ENST00000421523 HFE2Q6ZVN8 426 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 ERMP1Q7Z2K6 904 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 ARRDC4Q8NCT1 418 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 PRSS33Q8NF86 280 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 FAM151AQ8WW52 585 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 DOCK2Q92608 1830 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 ZDHHC15Q96MV8 337 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 CHMP4AQ9BY43 222 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 BRWD1Q9NSI6 2320 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 TMEM39AQ9NV64 488 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 FLRT1Q9NZU1 646 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 NCOR2Q9Y618 2525 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
HDAC8-212ENST00000421523 UTYO14607 1347 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 PHF20L1A8MW92 1017 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 SLURP2P0DP57 97 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 ACRP10323 421 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 CYP2C19P33261 490 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 RABGGTBP53611 331 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 HMGCS2P54868 508 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 GCKRQ14397 625 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 TWISTNBQ3B726 338 aaPredicted RBP7.13□□□□□ -1.27
HDAC8-212ENST00000421523 UBE3BQ7Z3V4 1068 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 GPR142Q7Z601 462 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 TRPV1Q8NER1 839 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 TDRD7Q8NHU6 1098 aaKnown RBP7.13□□□□□ -1.27
HDAC8-212ENST00000421523 USP6NLQ92738 828 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 PORCNQ9H237 461 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 CERS4Q9HA82 394 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 TXNRD2Q9NNW7 524 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 MORF4L1Q9UBU8 362 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 LRRFIP2Q9Y608 721 aaKnown RBP7.13□□□□□ -1.27
HDAC8-212ENST00000421523 MTCH2Q9Y6C9 303 aa7.13□□□□□ -1.27
HDAC8-212ENST00000421523 FANCIQ9NVI1 1328 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 DCXO43602 365 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 MYOGP15173 224 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 MAPK4P31152 587 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 PTPN5P54829 565 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 IRX3P78415 501 aaPredicted RBP7.12□□□□□ -1.27
HDAC8-212ENST00000421523 HDLBPQ00341 1268 aaKnown RBP7.12□□□□□ -1.27
HDAC8-212ENST00000421523 FLIIQ13045 1269 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 PABPC4Q13310 644 aaKnown RBP eCLIP7.12□□□□□ -1.27
HDAC8-212ENST00000421523 TMEM240Q5SV17 173 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 MORN1Q5T089 497 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 WDR78Q5VTH9 848 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 C16orf59Q7L2K0 433 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 PLEKHH3Q7Z736 793 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 WDR63Q8IWG1 891 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 PROCA1Q8NCQ7 364 aaPredicted RBP7.12□□□□□ -1.27
HDAC8-212ENST00000421523 SLC44A5Q8NCS7 719 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 GPRC5AQ8NFJ5 357 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 COL26A1Q96A83 441 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 PAGR1Q9BTK6 254 aa7.12□□□□□ -1.27
HDAC8-212ENST00000421523 SETXQ7Z333 2677 aaKnown RBP7.12□□□□□ -1.27
HDAC8-212ENST00000421523 RIF1Q5UIP0 2472 aaKnown RBP7.11□□□□□ -1.27
HDAC8-212ENST00000421523 TPRP12270 2363 aaKnown RBP7.11□□□□□ -1.27
HDAC8-212ENST00000421523 ATRNL1Q5VV63 1379 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 FRAT2O75474 233 aaPredicted RBP7.11□□□□□ -1.27
HDAC8-212ENST00000421523 RGS20O76081 388 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 HIBADHP31937 336 aaKnown RBP7.11□□□□□ -1.27
HDAC8-212ENST00000421523 FOXO4P98177 505 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 ATP2B2Q01814 1243 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 SPP2Q13103 211 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 IER5LQ5T953 404 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 RASIP1Q5U651 963 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 CCDC174Q6PII3 467 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 ZNF365Q70YC5 407 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 ZFPM1Q8IX07 1006 aa7.11□□□□□ -1.27
HDAC8-212ENST00000421523 LINS1Q8NG48 757 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms