RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 DOCK1Q14185 1865 aa11.5□□□□□ -0.57
SCRN1-204ENST00000421434 PTPRFP10586 1907 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 SOX1O00570 391 aaPredicted RBP11.49□□□□□ -0.57
SCRN1-204ENST00000421434 DYNLL1P63167 89 aaKnown RBP11.49□□□□□ -0.57
SCRN1-204ENST00000421434 ATP8B2P98198 1209 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 Q3C1V9 767 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 CCAR1Q8IX12 1150 aaKnown RBP11.49□□□□□ -0.57
SCRN1-204ENST00000421434 TRIB2Q92519 343 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 LRCH3Q96II8 777 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 CCDC8Q9H0W5 538 aaPredicted RBP11.49□□□□□ -0.57
SCRN1-204ENST00000421434 DNAJC18Q9H819 358 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 MORF4L1Q9UBU8 362 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 ZMYND8Q9ULU4 1186 aaPredicted RBP11.49□□□□□ -0.57
SCRN1-204ENST00000421434 FLT1P17948 1338 aa11.49□□□□□ -0.57
SCRN1-204ENST00000421434 C19orf81C9J6K1 198 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 SYN1P17600 705 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 CAPN2P17655 700 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 CYP7A1P22680 504 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 HOXA7P31268 230 aaPredicted RBP11.48□□□□□ -0.57
SCRN1-204ENST00000421434 HERVK_113P62684 666 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 POLA2Q14181 598 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 ZKSCAN2Q63HK3 967 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 NUDT12Q9BQG2 462 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 PAGR1Q9BTK6 254 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 GPR108Q9NPR9 543 aa11.48□□□□□ -0.57
SCRN1-204ENST00000421434 PIH1D3Q9NQM4 214 aaKnown RBP11.48□□□□□ -0.57
SCRN1-204ENST00000421434 COL2A1P02458 1487 aaPredicted RBP11.48□□□□□ -0.57
SCRN1-204ENST00000421434 A0A0C4DFX4 3053 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 CCER2I3L3R5 266 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 IDH1O75874 414 aaKnown RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 GH2P01242 217 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 HLA-DOAP06340 250 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 PRKAR2AP13861 404 aaKnown RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 MNX1P50219 401 aaPredicted RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 ZYXQ15942 572 aaKnown RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 METTL16Q86W50 562 aaKnown RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 ANKLE1Q8NAG6 615 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 MIGA1Q8NAN2 632 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 SSH3Q8TE77 659 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 C11orf49Q9H6J7 331 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 EMILIN3Q9NT22 766 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 TLR7Q9NYK1 1049 aaKnown RBP11.47□□□□□ -0.57
SCRN1-204ENST00000421434 ZBTB21Q9ULJ3 1066 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 NDUFB9Q9Y6M9 179 aa11.47□□□□□ -0.57
SCRN1-204ENST00000421434 USP5P45974 858 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 ERVK-9P63128 1117 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 ERVK-24P63145 666 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 CACNB2Q08289 660 aaPredicted RBP11.46□□□□□ -0.57
SCRN1-204ENST00000421434 PDE3AQ14432 1141 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 CCL14Q16627 93 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 SLC17A8Q8NDX2 589 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 PORCNQ9H237 461 aa11.46□□□□□ -0.57
SCRN1-204ENST00000421434 CWC22Q9HCG8 908 aaKnown RBP11.46□□□□□ -0.57
SCRN1-204ENST00000421434 DBNLQ9UJU6 430 aaKnown RBP11.46□□□□□ -0.57
SCRN1-204ENST00000421434 A0A1W2PPC1 479 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 XRCC5P13010 732 aaKnown RBP11.45□□□□□ -0.58
SCRN1-204ENST00000421434 ZKSCAN1P17029 563 aaPredicted RBP11.45□□□□□ -0.58
SCRN1-204ENST00000421434 MAPK4P31152 587 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 RAB3GAP1Q15042 981 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L2Q6R6M4 530 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 PLEKHH3Q7Z736 793 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 ITPRIPQ8IWB1 547 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 MAGEB6Q8N7X4 407 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 SOCS4Q8WXH5 440 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 EAF2Q96CJ1 260 aaPredicted RBP11.45□□□□□ -0.58
SCRN1-204ENST00000421434 ZNF512BQ96KM6 892 aaPredicted RBP11.45□□□□□ -0.58
SCRN1-204ENST00000421434 FEZ1Q99689 392 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 GDF15Q99988 308 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 ANTXR1Q9H6X2 564 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 OGDHLQ9ULD0 1010 aa11.45□□□□□ -0.58
SCRN1-204ENST00000421434 CCND3P30281 292 aaPredicted RBP11.44□□□□□ -0.58
SCRN1-204ENST00000421434 RGS2P41220 211 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 WDR78Q5VTH9 848 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 FTSJ3Q8IY81 847 aaKnown RBP11.44□□□□□ -0.58
SCRN1-204ENST00000421434 USP6NLQ92738 828 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 BCL11AQ9H165 835 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 NOP58Q9Y2X3 529 aaKnown RBP11.44□□□□□ -0.58
SCRN1-204ENST00000421434 COL6A3P12111 3177 aa11.44□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L15C9J2P7 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L13C9JLJ4 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L11C9JVI0 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L18D6R9N7 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L22D6RA61 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 RLBP1P12271 317 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 BMP8BP34820 402 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 MAGEA10P43363 369 aaPredicted RBP11.43□□□□□ -0.58
SCRN1-204ENST00000421434 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
SCRN1-204ENST00000421434 CERKLQ49MI3 558 aaPredicted RBP11.43□□□□□ -0.58
SCRN1-204ENST00000421434 MORN1Q5T089 497 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms