RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 SNX16P57768 344 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 TIMM10P62072 90 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 TRIM58Q8NG06 486 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 CARD14Q9BXL6 1004 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 KLHL14Q9P2G3 628 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 RNF123Q5XPI4 1314 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.71□□□□□ -0.21
CLCN4-203ENST00000421085 LONRF2Q1L5Z9 754 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 ADALQ6DHV7 355 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 PPIP5K1Q6PFW1 1433 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
CLCN4-203ENST00000421085 MRFAP1L1Q96HT8 127 aa13.71□□□□□ -0.22
CLCN4-203ENST00000421085 MYL10Q9BUA6 226 aa13.71□□□□□ -0.22
CLCN4-203ENST00000421085 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.22
CLCN4-203ENST00000421085 PLB1Q6P1J6 1458 aa13.71□□□□□ -0.22
CLCN4-203ENST00000421085 FLOT1O75955 427 aa13.71□□□□□ -0.22
CLCN4-203ENST00000421085 BIRC3Q13489 604 aa13.71□□□□□ -0.22
CLCN4-203ENST00000421085 RABGAP1Q9Y3P9 1069 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 CRCPO75575 148 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 TBC1D8O95759 1140 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 PFKFB1P16118 471 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 DYMQ7RTS9 669 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
CLCN4-203ENST00000421085 KIAA0586Q9BVV6 1533 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-203ENST00000421085 NBPF14Q5TI25 921 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 RNF168Q8IYW5 571 aaPredicted RBP13.7□□□□□ -0.22
CLCN4-203ENST00000421085 CCT6BQ92526 530 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 KIFC2Q96AC6 838 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 PPP1R13BQ96KQ4 1090 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 TESK2Q96S53 571 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 KCNJ14Q9UNX9 436 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 MAP7Q14244 749 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 LIN9Q5TKA1 542 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 GSDMBQ8TAX9 411 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 RILPQ96NA2 401 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 NAP1L4Q99733 375 aaKnown RBP13.7□□□□□ -0.22
CLCN4-203ENST00000421085 NRBP1Q9UHY1 535 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 STX10O60499 249 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 RPSAP08865 295 aaKnown RBP13.7□□□□□ -0.22
CLCN4-203ENST00000421085 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 CHAMP1Q96JM3 812 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 HINFPQ9BQA5 517 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 NESP48681 1621 aa13.7□□□□□ -0.22
CLCN4-203ENST00000421085 OPHN1O60890 802 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 DBNDD2Q9BQY9 259 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 TBC1D7Q9P0N9 293 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 PARP2Q9UGN5 583 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 HYOU1Q9Y4L1 999 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 CHRNA2Q15822 529 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 PHLDB3Q6NSJ2 640 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 CCDC84Q86UT8 332 aaPredicted RBP13.69□□□□□ -0.22
CLCN4-203ENST00000421085 MPHOSPH6Q99547 160 aaKnown RBP13.69□□□□□ -0.22
CLCN4-203ENST00000421085 NLRC4Q9NPP4 1024 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 PNMA6EA0A0J9YXQ4 647 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 SESN3P58005 492 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 FCHSD1Q86WN1 690 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 TACC3Q9Y6A5 838 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 NUP160Q12769 1436 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 TROVE2P10155 538 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLCN4-203ENST00000421085 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 VPS37BQ9H9H4 285 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 USTQ9Y2C2 406 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 MAP3K5Q99683 1374 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 DIXDC1Q155Q3 683 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 ARMT1Q9H993 441 aa13.69□□□□□ -0.22
CLCN4-203ENST00000421085 KCNK3O14649 394 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 GAS8O95995 478 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 TTC36A6NLP5 189 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-203ENST00000421085 PER1O15534 1290 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-203ENST00000421085 KCNJ12Q14500 433 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 PFDN4Q9NQP4 134 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 PSDA5PKW4 1024 aaPredicted RBP13.68□□□□□ -0.22
CLCN4-203ENST00000421085 RABGGTAQ92696 567 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 ADGRL1O94910 1474 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 FAM170AA1A519 330 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 GPAA1O43292 621 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 BAG2O95816 211 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 GSPT1P15170 499 aaKnown RBP13.68□□□□□ -0.22
CLCN4-203ENST00000421085 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 HOMER3Q9NSC5 361 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 LUC7L3O95232 432 aaKnown RBP13.68□□□□□ -0.22
CLCN4-203ENST00000421085 NELFCDQ8IXH7 590 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 EFCAB13Q8IY85 973 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 MYO1AQ9UBC5 1043 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 MTMR6Q9Y217 621 aa13.68□□□□□ -0.22
CLCN4-203ENST00000421085 KRIT1O00522 736 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 BUB1O43683 1085 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 KCTD16Q68DU8 428 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 ZNF804AQ7Z570 1209 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 NIP7Q9Y221 180 aaKnown RBP eCLIP13.67□□□□□ -0.22
CLCN4-203ENST00000421085 CHMP2AO43633 222 aa13.67□□□□□ -0.22
CLCN4-203ENST00000421085 HERC4Q5GLZ8 1057 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms