RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 HOMER1Q86YM7 354 aa16.54■□□□□ 0.24
CHRD-204ENST00000420973 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
CHRD-204ENST00000420973 USP27XA6NNY8 438 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 G3V3G9 751 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 AKAP17AQ02040 695 aaKnown RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 CCAR2Q8N163 923 aaKnown RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 VGLL2Q8N8G2 317 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 RPGRQ92834 1020 aaKnown RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 JPH2Q9BR39 696 aaPredicted RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 QTRT2Q9H974 415 aaKnown RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 VPS18Q9P253 973 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 RIC1Q4ADV7 1423 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 CCDC192P0DO97 292 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 ANO6Q4KMQ2 910 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 HSP90AA4PQ58FG1 418 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 FOXR1Q6PIV2 292 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 CNBD1Q8NA66 436 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 EPB41L4AQ9HCS5 686 aaPredicted RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 CFAP45Q9UL16 551 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 USP8P40818 1118 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 GSCP56915 257 aaPredicted RBP16.53■□□□□ 0.24
CHRD-204ENST00000420973 DIXDC1Q155Q3 683 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 NBPF9Q3BBW0 867 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 KCNB2Q92953 911 aa16.53■□□□□ 0.24
CHRD-204ENST00000420973 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.24
CHRD-204ENST00000420973 SAP30BPQ9UHR5 308 aaKnown RBP16.52■□□□□ 0.24
CHRD-204ENST00000420973 BECN2A8MW95 431 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 USP17L12C9JPN9 530 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 USP17L21D6R901 530 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 EXOSC10Q01780 885 aaKnown RBP16.52■□□□□ 0.23
CHRD-204ENST00000420973 PDILTQ8N807 584 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 PGBD1Q96JS3 809 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 PSMD1Q99460 953 aa16.52■□□□□ 0.23
CHRD-204ENST00000420973 PDE6BP35913 854 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 NFIXQ14938 502 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 WTAPQ15007 396 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
CHRD-204ENST00000420973 HIBADHP31937 336 aaKnown RBP16.51■□□□□ 0.23
CHRD-204ENST00000420973 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 CAND2O75155 1236 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 CDC27P30260 824 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 USP5P45974 858 aa16.51■□□□□ 0.23
CHRD-204ENST00000420973 RBM5P52756 815 aaKnown RBP eCLIP16.51■□□□□ 0.238e-11■■□□□ 12.7
CHRD-204ENST00000420973 CACTINQ8WUQ7 758 aaKnown RBP16.51■□□□□ 0.23
CHRD-204ENST00000420973 ABCC12Q96J65 1359 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 CYP2D6P10635 497 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 LIG3P49916 1009 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 SRRTQ9BXP5 876 aaKnown RBP16.5■□□□□ 0.23
CHRD-204ENST00000420973 CPSF2Q9P2I0 782 aaKnown RBP16.5■□□□□ 0.23
CHRD-204ENST00000420973 PARP4Q9UKK3 1724 aaKnown RBP16.5■□□□□ 0.23
CHRD-204ENST00000420973 NMT2O60551 498 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 SKILP12757 684 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 UBE3CQ15386 1083 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 ZNF396Q96N95 335 aaPredicted RBP16.5■□□□□ 0.23
CHRD-204ENST00000420973 MCM9Q9NXL9 1143 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 RESTQ13127 1097 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 MAP9Q49MG5 647 aa16.5■□□□□ 0.23
CHRD-204ENST00000420973 MB21D2Q8IYB1 491 aaPredicted RBP16.5■□□□□ 0.23
CHRD-204ENST00000420973 CARMIL3Q8ND23 1372 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 GSG1L2A8MUP6 293 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 FDPSP14324 419 aaKnown RBP16.49■□□□□ 0.23
CHRD-204ENST00000420973 TYRO3Q06418 890 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 SWT1Q5T5J6 900 aaKnown RBP16.49■□□□□ 0.23
CHRD-204ENST00000420973 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
CHRD-204ENST00000420973 GOLGA6L19H0YKK7 550 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 APOA5Q6Q788 366 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 OLFM4Q6UX06 510 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 NBPF11Q86T75 865 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 SUGP1Q8IWZ8 645 aaKnown RBP16.49■□□□□ 0.23
CHRD-204ENST00000420973 FAM84BQ96KN1 310 aaPredicted RBP16.49■□□□□ 0.23
CHRD-204ENST00000420973 TTC36A6NLP5 189 aa16.49■□□□□ 0.23
CHRD-204ENST00000420973 VPS72Q15906 364 aa16.48■□□□□ 0.23
CHRD-204ENST00000420973 NBPF3Q9H094 633 aa16.48■□□□□ 0.23
CHRD-204ENST00000420973 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
CHRD-204ENST00000420973 H2AFXP16104 143 aaPredicted RBP16.48■□□□□ 0.23
CHRD-204ENST00000420973 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
CHRD-204ENST00000420973 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
CHRD-204ENST00000420973 RPS6KA4O75676 772 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 UFL1O94874 794 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 ERLIN2O94905 339 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 PAX7P23759 505 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 MCM6Q14566 821 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 BARGINQ6ZT62 677 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 JMYQ8N9B5 988 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 NARFQ9UHQ1 456 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 TSPY2A6NKD2 308 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 PHACTR2O75167 634 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 FGFR2P21802 821 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 ZNF165P49910 485 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 PPARAQ07869 468 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 RTN1Q16799 776 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 LRRN4CLQ8ND94 238 aa16.47■□□□□ 0.23
CHRD-204ENST00000420973 EXOC4Q96A65 974 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms