RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 TRIM34Q9BYJ4 488 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 NACAP1Q9BZK3 213 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 ZCCHC17Q9NP64 241 aaKnown RBP17.27■□□□□ 0.36
PTPN18-204ENST00000420717 ZBTB21Q9ULJ3 1066 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
PTPN18-204ENST00000420717 CXCL11O14625 94 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 CYP2D6P10635 497 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
PTPN18-204ENST00000420717 SNAPC2Q13487 334 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 CCDC129Q6ZRS4 1044 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 ZNF589Q86UQ0 364 aaPredicted RBP17.26■□□□□ 0.35
PTPN18-204ENST00000420717 WDR18Q9BV38 432 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 DIAPH3Q9NSV4 1193 aa17.26■□□□□ 0.35
PTPN18-204ENST00000420717 A0A0G2JLL6 359 aaPredicted RBP17.25■□□□□ 0.35
PTPN18-204ENST00000420717 CETPP11597 493 aa17.25■□□□□ 0.35
PTPN18-204ENST00000420717 JAG1P78504 1218 aa17.25■□□□□ 0.35
PTPN18-204ENST00000420717 MOGSQ13724 837 aa17.25■□□□□ 0.35
PTPN18-204ENST00000420717 NOM1Q5C9Z4 860 aaKnown RBP17.25■□□□□ 0.35
PTPN18-204ENST00000420717 PRRT2Q7Z6L0 340 aaPredicted RBP17.25■□□□□ 0.35
PTPN18-204ENST00000420717 BRI3BPQ8WY22 251 aa17.25■□□□□ 0.35
PTPN18-204ENST00000420717 CYP2D7A0A087X1C5 515 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 USP17L5A8MUK1 530 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 IGF2BP3O00425 579 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPN18-204ENST00000420717 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 TDO2P48775 406 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 MKRN3Q13064 507 aaKnown RBP17.24■□□□□ 0.35
PTPN18-204ENST00000420717 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 VPS53Q5VIR6 699 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 IFNL1Q8IU54 200 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 ANAPC4Q9UJX5 808 aa17.24■□□□□ 0.35
PTPN18-204ENST00000420717 CCL15-CCL14A0A0B4J2E2 113 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 FOXN1O15353 648 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 HSPD1P10809 573 aaKnown RBP17.23■□□□□ 0.35
PTPN18-204ENST00000420717 CHMLP26374 656 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 CCL15Q16663 113 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 CERKLQ49MI3 558 aaPredicted RBP17.23■□□□□ 0.35
PTPN18-204ENST00000420717 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 CCDC17Q96LX7 622 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 PTPN18Q99952 460 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 BEGAINQ9BUH8 593 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 NAPBQ9H115 298 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 AS3MTQ9HBK9 375 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 ZHX2Q9Y6X8 837 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 PLIN4Q96Q06 1357 aa17.23■□□□□ 0.35
PTPN18-204ENST00000420717 SMIM22K7EJ46 135 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 GDF11O95390 407 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 CDK8P49336 464 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 CTCFP49711 727 aaPredicted RBP17.22■□□□□ 0.35
PTPN18-204ENST00000420717 SH3D19Q5HYK7 790 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 CWC27Q6UX04 472 aaKnown RBP17.22■□□□□ 0.35
PTPN18-204ENST00000420717 SLC44A5Q8NCS7 719 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 ZNF280CQ8ND82 737 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 DSCC1Q9BVC3 393 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 SLC45A1Q9Y2W3 748 aa17.22■□□□□ 0.35
PTPN18-204ENST00000420717 GH2P01242 217 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 APPP05067 770 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 FGRP09769 529 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 HSPA8P11142 646 aaKnown RBP17.21■□□□□ 0.35
PTPN18-204ENST00000420717 GUCY1A2P33402 732 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 PPARAQ07869 468 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 ABCB5Q2M3G0 1257 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 SHROOM1Q2M3G4 852 aaPredicted RBP17.21■□□□□ 0.35
PTPN18-204ENST00000420717 TMEM179Q6ZVK1 233 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 ANKRD23Q86SG2 305 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 IL25Q9H293 177 aa17.21■□□□□ 0.35
PTPN18-204ENST00000420717 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.21■□□□□ 0.35
PTPN18-204ENST00000420717 FGAP02671 866 aa17.2■□□□□ 0.34
PTPN18-204ENST00000420717 OTUD7BQ6GQQ9 843 aa17.2■□□□□ 0.34
PTPN18-204ENST00000420717 SKAP1Q86WV1 359 aa17.2■□□□□ 0.34
PTPN18-204ENST00000420717 PROCA1Q8NCQ7 364 aaPredicted RBP17.2■□□□□ 0.34
PTPN18-204ENST00000420717 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
PTPN18-204ENST00000420717 ZNF287Q9HBT7 754 aa17.2■□□□□ 0.34
PTPN18-204ENST00000420717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
PTPN18-204ENST00000420717 SGSM2O43147 1006 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 RASA1P20936 1047 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 NT5C2P49902 561 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 BACE1P56817 501 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 GPAT2Q6NUI2 795 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
PTPN18-204ENST00000420717 CCDC84Q86UT8 332 aaPredicted RBP17.19■□□□□ 0.34
PTPN18-204ENST00000420717 FAM43AQ8N2R8 423 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 C12orf42Q96LP6 360 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 PRDM10Q9NQV6 1147 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 ADGRA2Q96PE1 1338 aa17.19■□□□□ 0.34
PTPN18-204ENST00000420717 MINDY4BA8MYZ0 360 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 C19orf81C9J6K1 198 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 BTBD19C9JJ37 291 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 SLC3A2P08195 630 aaKnown RBP17.18■□□□□ 0.34
PTPN18-204ENST00000420717 PCP11498 1178 aaKnown RBP17.18■□□□□ 0.34
PTPN18-204ENST00000420717 AKR1B1P15121 316 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 SPP2Q13103 211 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 KIAA1683Q9H0B3 1180 aa17.18■□□□□ 0.34
PTPN18-204ENST00000420717 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
PTPN18-204ENST00000420717 TRIM75PA6NK02 468 aa17.17■□□□□ 0.34
PTPN18-204ENST00000420717 ORC4O43929 436 aa17.17■□□□□ 0.34
PTPN18-204ENST00000420717 TRPA1O75762 1119 aa17.17■□□□□ 0.34
PTPN18-204ENST00000420717 PDE4BQ07343 736 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms