RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 TNNQ9UQP3 1299 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 SIPA1L1O43166 1804 aa17.56■□□□□ 0.4
NFE4-201ENST00000420058 HERVK_113P62684 666 aa17.55■□□□□ 0.4
NFE4-201ENST00000420058 LRIT3Q3SXY7 679 aa17.55■□□□□ 0.4
NFE4-201ENST00000420058 LHX8Q68G74 356 aa17.55■□□□□ 0.4
NFE4-201ENST00000420058 Q7L0L9 218 aa17.55■□□□□ 0.4
NFE4-201ENST00000420058 VCANP13611 3396 aa17.55■□□□□ 0.4
NFE4-201ENST00000420058 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
NFE4-201ENST00000420058 CACNB2Q08289 660 aaPredicted RBP17.54■□□□□ 0.4
NFE4-201ENST00000420058 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
NFE4-201ENST00000420058 GPRC5AQ8NFJ5 357 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 TGFBRAP1Q8WUH2 860 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 PORCNQ9H237 461 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 DHX36Q9H2U1 1008 aaKnown RBP17.54■□□□□ 0.4
NFE4-201ENST00000420058 AS3MTQ9HBK9 375 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 SNRKQ9NRH2 765 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 EMILIN3Q9NT22 766 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 AATFQ9NY61 560 aaKnown RBP eCLIP17.54■□□□□ 0.4
NFE4-201ENST00000420058 LRP2BPQ9P2M1 347 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 ATAD5Q96QE3 1844 aa17.54■□□□□ 0.4
NFE4-201ENST00000420058 C19orf81C9J6K1 198 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 ASNSP08243 561 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 IRX3P78415 501 aaPredicted RBP17.53■□□□□ 0.4
NFE4-201ENST00000420058 CCL14Q16627 93 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 MORN1Q5T089 497 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 GORABQ5T7V8 394 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 MAPKAPK5Q8IW41 473 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 DEFB123Q8N688 67 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 NUDT12Q9BQG2 462 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 PALD1Q9ULE6 856 aa17.53■□□□□ 0.4
NFE4-201ENST00000420058 GDF11O95390 407 aa17.52■□□□□ 0.4
NFE4-201ENST00000420058 CYP2E1P05181 493 aaPredicted RBP17.52■□□□□ 0.4
NFE4-201ENST00000420058 UQCRFS1P1P0C7P4 283 aa17.52■□□□□ 0.4
NFE4-201ENST00000420058 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
NFE4-201ENST00000420058 DDX60LQ5H9U9 1706 aaKnown RBP17.52■□□□□ 0.39
NFE4-201ENST00000420058 FLT1P17948 1338 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 USP17L10C9JJH3 530 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 CCND3P30281 292 aaPredicted RBP17.51■□□□□ 0.39
NFE4-201ENST00000420058 ERVK-9P63128 1117 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 ERVK-24P63145 666 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 G3BP1Q13283 466 aaKnown RBP eCLIP17.51■□□□□ 0.39
NFE4-201ENST00000420058 NAA16Q6N069 864 aaPredicted RBP17.51■□□□□ 0.39
NFE4-201ENST00000420058 TDHQ8IZJ6 230 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 PRUNE2Q8WUY3 3088 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 TMOD4Q9NZQ9 345 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 ZBTB21Q9ULJ3 1066 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 EYSQ5T1H1 3165 aa17.51■□□□□ 0.39
NFE4-201ENST00000420058 CNMDO75829 334 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 BAG3O95817 575 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 GNAI2P04899 355 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 TRIM27P14373 513 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 MAPK4P31152 587 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 LRRC26Q2I0M4 334 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 GPR142Q7Z601 462 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 SOCS4Q8WXH5 440 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 DBNDD2Q9BQY9 259 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 GPR108Q9NPR9 543 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 GINM1Q9NU53 330 aa17.5■□□□□ 0.39
NFE4-201ENST00000420058 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
NFE4-201ENST00000420058 POLA2Q14181 598 aa17.49■□□□□ 0.39
NFE4-201ENST00000420058 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
NFE4-201ENST00000420058 STXBP5LQ9Y2K9 1186 aa17.49■□□□□ 0.39
NFE4-201ENST00000420058 SPTBN5Q9NRC6 3674 aaKnown RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 IGHA2P01877 340 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 PLCG2P16885 1265 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 TNNI3KQ59H18 835 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 PLEKHH3Q7Z736 793 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 TRMT44Q8IYL2 757 aaKnown RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 ZNF512BQ96KM6 892 aaPredicted RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 UBE2OQ9C0C9 1292 aaKnown RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 FLRT1Q9NZU1 646 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 SAP30BPQ9UHR5 308 aaKnown RBP17.48■□□□□ 0.39
NFE4-201ENST00000420058 FPGT-TNNI3KV9GXZ4 949 aa17.48■□□□□ 0.39
NFE4-201ENST00000420058 BCAR3O75815 825 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 RGS2P41220 211 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 ZAP70P43403 619 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 TATDN1Q6P1N9 297 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 USP17L2Q6R6M4 530 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 C12orf42Q96LP6 360 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 PAGR1Q9BTK6 254 aa17.47■□□□□ 0.39
NFE4-201ENST00000420058 CDK5RAP2Q96SN8 1893 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 POTEB2H3BUK9 544 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 GH2P01242 217 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 MAP2K5Q13163 448 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 ATF7IPQ6VMQ6 1270 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 CRACR2BQ8N4Y2 399 aaPredicted RBP17.46■□□□□ 0.39
NFE4-201ENST00000420058 SSH3Q8TE77 659 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 NOL10Q9BSC4 688 aaKnown RBP17.46■□□□□ 0.39
NFE4-201ENST00000420058 RABGAP1Q9Y3P9 1069 aa17.46■□□□□ 0.39
NFE4-201ENST00000420058 MYO5AQ9Y4I1 1855 aaKnown RBP17.46■□□□□ 0.38
NFE4-201ENST00000420058 MDM2Q00987 491 aaPredicted RBP17.45■□□□□ 0.38
NFE4-201ENST00000420058 CCDC158Q5M9N0 1113 aa17.45■□□□□ 0.38
NFE4-201ENST00000420058 CATSPERGQ6ZRH7 1159 aa17.45■□□□□ 0.38
NFE4-201ENST00000420058 ACER1Q8TDN7 264 aa17.45■□□□□ 0.38
NFE4-201ENST00000420058 GTF3C2Q8WUA4 911 aaPredicted RBP17.45■□□□□ 0.38
NFE4-201ENST00000420058 CLUAP1Q96AJ1 413 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms