RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 MYH1P12882 1939 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 USP17L10C9JJH3 530 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 MPHOSPH10O00566 681 aaKnown RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 GLRX3O76003 335 aaKnown RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 FMNL1O95466 1100 aaPredicted RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 GH2P01242 217 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 MX1P20591 662 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 OSBPP22059 807 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 SOX10P56693 466 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 JAG1P78504 1218 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
CTSA-205ENST00000419493 HDAC1Q13547 482 aaPredicted RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 MTMR2Q13614 643 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 ABCB5Q2M3G0 1257 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 TREML2Q5T2D2 321 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 B4GALNT3Q6L9W6 998 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 C17orf99Q6UX52 265 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 OTUD7AQ8TE49 926 aaPredicted RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 PUS7LQ9H0K6 701 aaKnown RBP11.63□□□□□ -0.55
CTSA-205ENST00000419493 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 ZBTB21Q9ULJ3 1066 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 FOCADQ5VW36 1801 aa11.63□□□□□ -0.55
CTSA-205ENST00000419493 C19orf81C9J6K1 198 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
CTSA-205ENST00000419493 HOXD10P28358 340 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 PSMC4P43686 418 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 BACE1P56817 501 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 ZYXQ15942 572 aaKnown RBP11.62□□□□□ -0.55
CTSA-205ENST00000419493 SHROOM1Q2M3G4 852 aaPredicted RBP11.62□□□□□ -0.55
CTSA-205ENST00000419493 TATDN1Q6P1N9 297 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 FEZ1Q99689 392 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 ARHGAP39Q9C0H5 1083 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 SLC45A1Q9Y2W3 748 aa11.62□□□□□ -0.55
CTSA-205ENST00000419493 ATAD5Q96QE3 1844 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 USP17L12C9JPN9 530 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 USP17L21D6R901 530 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 GNRH1P01148 92 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 APPP05067 770 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 ZFYP08048 801 aaPredicted RBP11.61□□□□□ -0.55
CTSA-205ENST00000419493 CYP2D6P10635 497 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 IRX3P78415 501 aaPredicted RBP11.61□□□□□ -0.55
CTSA-205ENST00000419493 CAP1Q01518 475 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 NBPF11Q86T75 865 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 ANKRD13CQ8N6S4 541 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 PI4K2BQ8TCG2 481 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 APPBP2Q92624 585 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
CTSA-205ENST00000419493 SIPA1L1O43166 1804 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 CYP2D7A0A087X1C5 515 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 SHMT1P34896 483 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 FCGRTP55899 365 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 IRX6P78412 446 aaPredicted RBP11.6□□□□□ -0.55
CTSA-205ENST00000419493 MLLT1Q03111 559 aaPredicted RBP11.6□□□□□ -0.55
CTSA-205ENST00000419493 EVX2Q03828 476 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 SLC9C1Q4G0N8 1177 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 OSBP2Q969R2 916 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 LNPKQ9C0E8 428 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 ASCC2Q9H1I8 757 aaPredicted RBP11.6□□□□□ -0.55
CTSA-205ENST00000419493 SWAP70Q9UH65 585 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 PTCH2Q9Y6C5 1203 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 PHIPQ8WWQ0 1821 aa11.6□□□□□ -0.55
CTSA-205ENST00000419493 MINDY4BA8MYZ0 360 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 GPAA1O43292 621 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 MYCP01106 439 aaPredicted RBP11.59□□□□□ -0.55
CTSA-205ENST00000419493 IGHDP01880 384 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 BCRP11274 1271 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
CTSA-205ENST00000419493 USP14P54578 494 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 PDE1AP54750 535 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 GABPAQ06546 454 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 SEPT2Q15019 361 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 C12orf60Q5U649 245 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 USP17L2Q6R6M4 530 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 TRIM47Q96LD4 638 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 STRBPQ96SI9 672 aaKnown RBP11.59□□□□□ -0.55
CTSA-205ENST00000419493 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 ADGRA2Q96PE1 1338 aa11.59□□□□□ -0.55
CTSA-205ENST00000419493 MYH7P12883 1935 aa11.58□□□□□ -0.55
CTSA-205ENST00000419493 TRIM6-TRIM34B2RNG4 842 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 TNPO2O14787 897 aaKnown RBP11.58□□□□□ -0.56
CTSA-205ENST00000419493 GNAT2P19087 354 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 CTGFP29279 349 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 TDO2P48775 406 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 CDK8P49336 464 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 PRMT2P55345 433 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 CTR9Q6PD62 1173 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 CCAR1Q8IX12 1150 aaKnown RBP11.58□□□□□ -0.56
CTSA-205ENST00000419493 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 EMILIN3Q9NT22 766 aa11.58□□□□□ -0.56
CTSA-205ENST00000419493 ARPP21Q9UBL0 812 aaPredicted RBP11.58□□□□□ -0.56
CTSA-205ENST00000419493 BIN2Q9UBW5 565 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms