RNA–Protein interactions for RNA: ENST00000419338.5

DDX39B-206, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-206ENST00000419338 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 ERVK-24P63145 666 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 TFCP2Q12800 502 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 MTX1Q13505 466 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 MORN1Q5T089 497 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 METTL16Q86W50 562 aaKnown RBP17.3■□□□□ 0.36
DDX39B-206ENST00000419338 APBA2Q99767 749 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 NOL10Q9BSC4 688 aaKnown RBP17.3■□□□□ 0.36
DDX39B-206ENST00000419338 RAI14Q9P0K7 980 aa17.3■□□□□ 0.36
DDX39B-206ENST00000419338 LAMA2P24043 3122 aaKnown RBP17.3■□□□□ 0.36
DDX39B-206ENST00000419338 CUL9Q8IWT3 2517 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 SIPA1L1O43166 1804 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 IGSF3O75054 1194 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 LRRC26Q2I0M4 334 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 GPR142Q7Z601 462 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 FOXP4Q8IVH2 680 aaPredicted RBP17.29■□□□□ 0.36
DDX39B-206ENST00000419338 CCAR1Q8IX12 1150 aaKnown RBP17.29■□□□□ 0.36
DDX39B-206ENST00000419338 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 RBPJLQ9UBG7 517 aa17.29■□□□□ 0.36
DDX39B-206ENST00000419338 SRGAP3O43295 1099 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 BAG3O95817 575 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 GNAI3P08754 354 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 PLEKHH3Q7Z736 793 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.28■□□□□ 0.363e-66■□□□□ 9.6
DDX39B-206ENST00000419338 MEIS3Q99687 375 aa17.28■□□□□ 0.36
DDX39B-206ENST00000419338 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
DDX39B-206ENST00000419338 NOB1Q9ULX3 412 aaKnown RBP17.28■□□□□ 0.36
DDX39B-206ENST00000419338 UQCRFS1P1P0C7P4 283 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 CCND3P30281 292 aaPredicted RBP17.27■□□□□ 0.36
DDX39B-206ENST00000419338 PPP4CP60510 307 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
DDX39B-206ENST00000419338 Q3C1V9 767 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 PI16Q6UXB8 463 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 SH3RF3Q8TEJ3 882 aaPredicted RBP17.27■□□□□ 0.36
DDX39B-206ENST00000419338 PORCNQ9H237 461 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.36
DDX39B-206ENST00000419338 FRMPD3Q5JV73 1810 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 MAST2Q6P0Q8 1798 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 MSCO60682 206 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
DDX39B-206ENST00000419338 MCAMP43121 646 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 CCNA1P78396 465 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 MAP2K5Q13163 448 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 CRACR2BQ8N4Y2 399 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-206ENST00000419338 LBHD1Q9BQE6 289 aaPredicted RBP17.26■□□□□ 0.35
DDX39B-206ENST00000419338 TRIM34Q9BYJ4 488 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 DNAJC18Q9H819 358 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 ZBTB21Q9ULJ3 1066 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 FOCADQ5VW36 1801 aa17.26■□□□□ 0.35
DDX39B-206ENST00000419338 FLT1P17948 1338 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 CCL14Q16627 93 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 MFSD14CQ5VZR4 134 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 NAA16Q6N069 864 aaPredicted RBP17.25■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L2Q6R6M4 530 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 ATF7IPQ6VMQ6 1270 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 EDC3Q96F86 508 aaKnown RBP17.25■□□□□ 0.35
DDX39B-206ENST00000419338 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
DDX39B-206ENST00000419338 AATFQ9NY61 560 aaKnown RBP eCLIP17.25■□□□□ 0.357e-11■■■■□ 20.8
DDX39B-206ENST00000419338 PEX10O60683 326 aa17.24■□□□□ 0.35
DDX39B-206ENST00000419338 JAG1P78504 1218 aa17.24■□□□□ 0.35
DDX39B-206ENST00000419338 TRMT2AQ8IZ69 625 aaKnown RBP17.24■□□□□ 0.35
DDX39B-206ENST00000419338 TGFBRAP1Q8WUH2 860 aa17.24■□□□□ 0.35
DDX39B-206ENST00000419338 PAGR1Q9BTK6 254 aa17.24■□□□□ 0.35
DDX39B-206ENST00000419338 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
DDX39B-206ENST00000419338 EMILIN3Q9NT22 766 aa17.24■□□□□ 0.35
DDX39B-206ENST00000419338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.24■□□□□ 0.35
DDX39B-206ENST00000419338 CDK5RAP2Q96SN8 1893 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 GDF11O95390 407 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 HLA-DOAP06340 250 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 ZNF697Q5TEC3 545 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 ARHGAP45Q92619 1136 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 LPAR1Q92633 364 aa17.23■□□□□ 0.35
DDX39B-206ENST00000419338 SENP6Q9GZR1 1112 aaPredicted RBP17.23■□□□□ 0.35
DDX39B-206ENST00000419338 DDX20Q9UHI6 824 aaKnown RBP17.23■□□□□ 0.35
DDX39B-206ENST00000419338 EYSQ5T1H1 3165 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 SLC15A5A6NIM6 579 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L15C9J2P7 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L13C9JLJ4 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L11C9JVI0 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L18D6R9N7 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L22D6RA61 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L17D6RBQ6 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L19D6RCP7 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L20D6RJB6 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 DNM1LO00429 736 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 HOXC6P09630 235 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 USP17L24Q0WX57 530 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 LBX2Q6XYB7 198 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 MAPKAPK5Q8IW41 473 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 PRKAG2Q9UGJ0 569 aa17.22■□□□□ 0.35
DDX39B-206ENST00000419338 PTPREP23469 700 aa17.21■□□□□ 0.35
DDX39B-206ENST00000419338 USP14P54578 494 aa17.21■□□□□ 0.35
DDX39B-206ENST00000419338 G3BP1Q13283 466 aaKnown RBP eCLIP17.21■□□□□ 0.35
DDX39B-206ENST00000419338 CERS3Q8IU89 383 aa17.21■□□□□ 0.35
DDX39B-206ENST00000419338 GPR108Q9NPR9 543 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms