RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 SLC9C2Q5TAH2 1124 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 VPS37DQ86XT2 251 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 RPGRIP1Q96KN7 1286 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 NBPF3Q9H094 633 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 ADD3Q9UEY8 706 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 A6NNZ2 444 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 PPP1R12AO14974 1030 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 GYPCP04921 128 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 HSPD1P10809 573 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 CASP14P31944 242 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 PLCD1P51178 756 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 TUBB8Q3ZCM7 444 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 OTUD6BQ8N6M0 293 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 GDAP1L1Q96MZ0 367 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 GOLGA8BA8MQT2 603 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 MEFVO15553 781 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 KCNQ3O43525 872 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 KIAA0754O94854 1291 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 RDXP35241 583 aaKnown RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 FXR1P51114 621 aaKnown RBP eCLIP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 CCNI2Q6ZMN8 369 aaPredicted RBP9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 MMS19Q96T76 1030 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 SAMM50Q9Y512 469 aa9.07□□□□□ -0.96
HMGXB4-202ENST00000418170 ITIH6Q6UXX5 1313 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 KLF18A0A0U1RQI7 1052 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 GOLGA8KD6RF30 607 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 PSMD14O00487 310 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 CPLX1O14810 134 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 MYBL2P10244 700 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 ERVK-24P63145 666 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 TTC39AQ5SRH9 613 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 RABEP2Q9H5N1 569 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 CD248Q9HCU0 757 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 BCCIPQ9P287 314 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 ZMYM6O95789 1325 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 SKOR1P84550 965 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 PROSER3Q2NL68 480 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 YTHDF3Q7Z739 585 aaKnown RBP9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 COPRSQ9NQ92 184 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 NDUFAB1O14561 156 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 LRCH2Q5VUJ6 765 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 VEZTQ9HBM0 779 aa9.06□□□□□ -0.96
HMGXB4-202ENST00000418170 ZMYM1Q5SVZ6 1142 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 WLSQ5T9L3 541 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 TICAM2Q86XR7 235 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 EGFL6Q8IUX8 553 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 GSPT2Q8IYD1 628 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 AENQ8WTP8 325 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 TBC1D22AQ8WUA7 517 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 N4BP2L2Q92802 583 aaPredicted RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 FAXDC2Q96IV6 333 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 CTAGE1Q96RT6 745 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 DBNDD2Q9BQY9 259 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 FAM184BQ9ULE4 1060 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 ECM29Q5VYK3 1845 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 NWD2Q9ULI1 1742 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 TMCO5BA8MYB1 307 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 ZMYND10O75800 440 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 NF2P35240 595 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 CKAP4Q07065 602 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 TFCP2Q12800 502 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 SPATA1Q5VX52 437 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 CYP26C1Q6V0L0 522 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 KRI1Q8N9T8 703 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 ABHD10Q9NUJ1 306 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 SAR1BQ9Y6B6 198 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 ZEB2O60315 1214 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 EPB41P11171 864 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 GCFC2P16383 781 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 PPP2R5AQ15172 486 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 PAPD7Q5XG87 772 aaKnown RBP9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 SPATA20Q8TB22 786 aa9.05□□□□□ -0.96
HMGXB4-202ENST00000418170 MRPL12P52815 198 aaKnown RBP9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 SMTNP53814 917 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 FILIP1LQ4L180 1135 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 UBE3BQ7Z3V4 1068 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 ANKRD18AQ8IVF6 992 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 LGR6Q9HBX8 967 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 HDAC6Q9UBN7 1215 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 MYO5AQ9Y4I1 1855 aaKnown RBP9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 SEMA3EO15041 775 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 OPA1O60313 960 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 HOXC9P31274 260 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 PLCB4Q15147 1175 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 KRT40Q6A162 431 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 AIFM3Q96NN9 605 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 ALG1Q9BT22 464 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 KLC4Q9NSK0 619 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 ODF2LQ9ULJ1 636 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 MAST3O60307 1309 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 ENC1O14682 589 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 PRC1O43663 620 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 MICALCLQ6ZW33 695 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 SLF1Q9BQI6 1058 aa9.04□□□□□ -0.96
HMGXB4-202ENST00000418170 VCPKMTQ9H867 229 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms