RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 SARSP49591 514 aaKnown RBP16.58■□□□□ 0.24
HDAC9-208ENST00000417496 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.24
HDAC9-208ENST00000417496 TOGARAM2Q6ZUX3 1019 aa16.58■□□□□ 0.24
HDAC9-208ENST00000417496 DHX58Q96C10 678 aa16.58■□□□□ 0.24
HDAC9-208ENST00000417496 NIP7Q9Y221 180 aaKnown RBP eCLIP16.58■□□□□ 0.24
HDAC9-208ENST00000417496 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 LRP6O75581 1613 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 VWA3AA6NCI4 1184 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 ACTN4O43707 911 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 ATP6V1AP38606 617 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 IGHMBP2P38935 993 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 STX17P56962 302 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 BAG1Q99933 345 aaPredicted RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 DESI2Q9BSY9 194 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 PPP2R2CQ9Y2T4 447 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 SRPRBQ9Y5M8 271 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 V9GY48 417 aaPredicted RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 ZNF18P17022 549 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 DYNLL1P63167 89 aaKnown RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 MORC3Q14149 939 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 SMYD4Q8IYR2 804 aaPredicted RBP16.57■□□□□ 0.24
HDAC9-208ENST00000417496 STAMQ92783 540 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 WDR24Q96S15 920 aa16.57■□□□□ 0.24
HDAC9-208ENST00000417496 PNPLA7Q6ZV29 1317 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 GNAT2P19087 354 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 TC2NQ8N9U0 490 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 HOOK1Q9UJC3 728 aaKnown RBP16.56■□□□□ 0.24
HDAC9-208ENST00000417496 NUP98P52948 1817 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 ECM29Q5VYK3 1845 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 CCDC196A0A1B0GTZ2 297 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 MTF1Q14872 753 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 SEC23AQ15436 765 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 PKN1Q16512 942 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 CCDC152Q4G0S7 254 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 KRT222Q8N1A0 295 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 ENAHQ8N8S7 591 aaPredicted RBP16.56■□□□□ 0.24
HDAC9-208ENST00000417496 CARD6Q9BX69 1037 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 ITGB4P16144 1822 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 MYH3P11055 1940 aa16.56■□□□□ 0.24
HDAC9-208ENST00000417496 CLCN6P51797 869 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 TBX2Q13207 712 aaPredicted RBP16.55■□□□□ 0.24
HDAC9-208ENST00000417496 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 SPECC1LQ69YQ0 1117 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 MLKLQ8NB16 471 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 TEX33O43247 280 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 H2AFXP16104 143 aaPredicted RBP16.55■□□□□ 0.24
HDAC9-208ENST00000417496 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 SMIM5Q71RC9 77 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 TMTC2Q8N394 836 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 CCDC87Q9NVE4 849 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 PARP3Q9Y6F1 533 aa16.55■□□□□ 0.24
HDAC9-208ENST00000417496 ARHGAP6O43182 974 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 NMT2O60551 498 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 CD44P16070 742 aaKnown RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 GNG11P61952 73 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 AKAP17AQ02040 695 aaKnown RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 ZNF174Q15697 407 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 ZNF771Q7L3S4 317 aaPredicted RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 ENOX1Q8TC92 643 aaKnown RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 ESR2Q92731 530 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 IRX2Q9BZI1 471 aaPredicted RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 RNF41Q9H4P4 317 aaPredicted RBP16.54■□□□□ 0.24
HDAC9-208ENST00000417496 PHLPP2Q6ZVD8 1323 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 ITPK1Q13572 414 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
HDAC9-208ENST00000417496 A0A0U1RQJ8 604 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 TRIM75PA6NK02 468 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 NTSR2O95665 410 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 SLFN14P0C7P3 912 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 VEGFAP15692 232 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 DHX8Q14562 1220 aaKnown RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 KARSQ15046 597 aaKnown RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 ZNF579Q8NAF0 562 aaKnown RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 ATRIPQ8WXE1 791 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 UBXN4Q92575 508 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 SYMPKQ92797 1274 aaKnown RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 ZSCAN10Q96SZ4 725 aaPredicted RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 COL4A1P02462 1669 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
HDAC9-208ENST00000417496 ADAMTS3O15072 1205 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 KCNQ4P56696 695 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 MNS1Q8NEH6 495 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 ZNF384Q8TF68 577 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 AK7Q96M32 723 aa16.53■□□□□ 0.24
HDAC9-208ENST00000417496 NID2Q14112 1375 aa16.52■□□□□ 0.24
HDAC9-208ENST00000417496 CCP110O43303 1012 aa16.52■□□□□ 0.24
HDAC9-208ENST00000417496 ZSCAN12O43309 604 aa16.52■□□□□ 0.24
HDAC9-208ENST00000417496 FUT2Q10981 343 aa16.52■□□□□ 0.24
HDAC9-208ENST00000417496 IFIT1BQ5T764 474 aaKnown RBP16.52■□□□□ 0.24
HDAC9-208ENST00000417496 NUTM2AQ8IVF1 878 aaPredicted RBP16.52■□□□□ 0.24
HDAC9-208ENST00000417496 RIOK1Q9BRS2 568 aaKnown RBP16.52■□□□□ 0.24
HDAC9-208ENST00000417496 SOWAHDA6NJG2 315 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 NR1I3Q14994 352 aa16.52■□□□□ 0.23
HDAC9-208ENST00000417496 ELOA2Q8IYF1 753 aaPredicted RBP16.52■□□□□ 0.23
HDAC9-208ENST00000417496 SPATA20Q8TB22 786 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms