RNA–Protein interactions for RNA: ENST00000417348.2

SLC39A1-206, Transcript of solute carrier family 39 member 1, humanhuman

TSL 3

Gene SLC39A1, Length 912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-206ENST00000417348 SHMT1P34896 483 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 TDO2P48775 406 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 GRM1Q13255 1194 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 CERKLQ49MI3 558 aaPredicted RBP23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 OTUD5Q96G74 571 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 FAM227BQ96M60 508 aa23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 EPB41L4AQ9HCS5 686 aaPredicted RBP23.08■■□□□ 1.29
SLC39A1-206ENST00000417348 ATAD5Q96QE3 1844 aa23.08■■□□□ 1.28
SLC39A1-206ENST00000417348 SLC3A2P08195 630 aaKnown RBP23.07■■□□□ 1.28
SLC39A1-206ENST00000417348 PCP11498 1178 aaKnown RBP23.07■■□□□ 1.28
SLC39A1-206ENST00000417348 NAPBQ9H115 298 aa23.07■■□□□ 1.28
SLC39A1-206ENST00000417348 ANAPC4Q9UJX5 808 aa23.07■■□□□ 1.28
SLC39A1-206ENST00000417348 PHIPQ8WWQ0 1821 aa23.07■■□□□ 1.28
SLC39A1-206ENST00000417348 APPP05067 770 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 FASTKD5Q7L8L6 764 aaKnown RBP23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 ZIC5Q96T25 663 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 DSCC1Q9BVC3 393 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 CABP5Q9NP86 173 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 ZBTB21Q9ULJ3 1066 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 SLC45A1Q9Y2W3 748 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 ZHX2Q9Y6X8 837 aa23.06■■□□□ 1.28
SLC39A1-206ENST00000417348 A0A0G2JLL6 359 aaPredicted RBP23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 C19orf81C9J6K1 198 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 FOXP2O15409 715 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 HSPD1P10809 573 aaKnown RBP23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 CHMLP26374 656 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 SH3D19Q5HYK7 790 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 PRRT2Q7Z6L0 340 aaPredicted RBP23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 IFNL1Q8IU54 200 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 ZNF280CQ8ND82 737 aa23.05■■□□□ 1.28
SLC39A1-206ENST00000417348 FAM196BA6NMK8 535 aa23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 HSPA1AP0DMV8 641 aaKnown RBP23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 HSPA1BP0DMV9 641 aaKnown RBP23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 CDK8P49336 464 aa23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 RRP1BQ14684 758 aaKnown RBP23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 ABCB5Q2M3G0 1257 aa23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 CWC27Q6UX04 472 aaKnown RBP23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 TMEM179Q6ZVK1 233 aa23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 PROCA1Q8NCQ7 364 aaPredicted RBP23.04■■□□□ 1.28
SLC39A1-206ENST00000417348 FGRP09769 529 aa23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 CTCFP49711 727 aaPredicted RBP23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 PDE4BQ07343 736 aa23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 ANKRD23Q86SG2 305 aa23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 ZNF589Q86UQ0 364 aaPredicted RBP23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 MYH8P13535 1937 aa23.03■■□□□ 1.28
SLC39A1-206ENST00000417348 PTPRFP10586 1907 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 PPARAQ07869 468 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 PPP4R3BQ5MIZ7 849 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 CNKSR2Q8WXI2 1034 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 RNF186Q9NXI6 227 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 CTNNA3Q9UI47 895 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 SYNPO2Q9UMS6 1093 aa23.02■■□□□ 1.28
SLC39A1-206ENST00000417348 CCL15-CCL14A0A0B4J2E2 113 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 FGAP02671 866 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 CYP2D6P10635 497 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 CCL15Q16663 113 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 CCDC129Q6ZRS4 1044 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 BRI3BPQ8WY22 251 aa23.01■■□□□ 1.27
SLC39A1-206ENST00000417348 GH2P01242 217 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 SLURP2P0DP57 97 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 USP14P54578 494 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 BACE1P56817 501 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 VPS53Q5VIR6 699 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 PTPN18Q99952 460 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 PRDM10Q9NQV6 1147 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 PLIN4Q96Q06 1357 aa23■■□□□ 1.27
SLC39A1-206ENST00000417348 MINDY4BA8MYZ0 360 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 USP17L10C9JJH3 530 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 IGF2BP3O00425 579 aaKnown RBP eCLIP22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 SGSM2O43147 1006 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 MOGSQ13724 837 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 C12orf42Q96LP6 360 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 KIAA1683Q9H0B3 1180 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 KANSL2Q9H9L4 492 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 MKNK2Q9HBH9 465 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 LOC285556D6RIA3 1793 aa22.99■■□□□ 1.27
SLC39A1-206ENST00000417348 GREB1LQ9C091 1923 aaPredicted RBP22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 ORC4O43929 436 aa22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 MKRN3Q13064 507 aaKnown RBP22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 SPP2Q13103 211 aa22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 PABPC4Q13310 644 aaKnown RBP eCLIP22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 CASC1Q6TDU7 716 aa22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 DYNLL2Q96FJ2 89 aa22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 RNF41Q9H4P4 317 aaPredicted RBP22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 SH2D4AQ9H788 454 aa22.98■■□□□ 1.27
SLC39A1-206ENST00000417348 CYP2D7A0A087X1C5 515 aa22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 GDF11O95390 407 aa22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 RASA1P20936 1047 aa22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 SLC4A8Q2Y0W8 1093 aa22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 ZNF444Q8N0Y2 327 aaPredicted RBP22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 AGTPBP1Q9UPW5 1226 aa22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.97■■□□□ 1.27
SLC39A1-206ENST00000417348 FOXN1O15353 648 aa22.96■■□□□ 1.27
SLC39A1-206ENST00000417348 GUCY1A2P33402 732 aa22.96■■□□□ 1.27
SLC39A1-206ENST00000417348 JAG1P78504 1218 aa22.96■■□□□ 1.27
SLC39A1-206ENST00000417348 SLC44A5Q8NCS7 719 aa22.96■■□□□ 1.27
SLC39A1-206ENST00000417348 LAMA4Q16363 1823 aa22.96■■□□□ 1.27
SLC39A1-206ENST00000417348 TRIM75PA6NK02 468 aa22.95■■□□□ 1.26
SLC39A1-206ENST00000417348 BTBD19C9JJ37 291 aa22.95■■□□□ 1.26
SLC39A1-206ENST00000417348 TRPA1O75762 1119 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms