RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 WDR18Q9BV38 432 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 ZBTB21Q9ULJ3 1066 aa18.87■□□□□ 0.61
ITGB1-204ENST00000417122 ECM2O94769 699 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-204ENST00000417122 MBD4O95243 580 aa18.86■□□□□ 0.61
ITGB1-204ENST00000417122 BCRP11274 1271 aa18.86■□□□□ 0.61
ITGB1-204ENST00000417122 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
ITGB1-204ENST00000417122 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-204ENST00000417122 MCM9Q9NXL9 1143 aa18.86■□□□□ 0.61
ITGB1-204ENST00000417122 TTC41PQ6P2S7 1318 aa18.85■□□□□ 0.61
ITGB1-204ENST00000417122 GNRH1P01148 92 aa18.85■□□□□ 0.61
ITGB1-204ENST00000417122 SMCR8Q8TEV9 937 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-204ENST00000417122 PNMA3Q9UL41 463 aa18.85■□□□□ 0.61
ITGB1-204ENST00000417122 PRKAB2O43741 272 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 GH2P01242 217 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 CTGFP29279 349 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 PSMC4P43686 418 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 BACE1P56817 501 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 MLLT1Q03111 559 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-204ENST00000417122 PABPC4Q13310 644 aaKnown RBP eCLIP18.84■□□□□ 0.61
ITGB1-204ENST00000417122 MTMR2Q13614 643 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 AAMPQ13685 434 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-204ENST00000417122 KBTBD3Q8NAB2 608 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 ATP8A2Q9NTI2 1148 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-204ENST00000417122 PTCH2Q9Y6C5 1203 aa18.84■□□□□ 0.61
ITGB1-204ENST00000417122 BAZ2AQ9UIF9 1905 aaKnown RBP18.83■□□□□ 0.6
ITGB1-204ENST00000417122 C19orf81C9J6K1 198 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 ERC2O15083 957 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 SHMT1P34896 483 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 GABPAQ06546 454 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 HDAC1Q13547 482 aaPredicted RBP18.83■□□□□ 0.6
ITGB1-204ENST00000417122 GCC1Q96CN9 775 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 PUS7LQ9H0K6 701 aaKnown RBP18.83■□□□□ 0.6
ITGB1-204ENST00000417122 TMOD4Q9NZQ9 345 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 MGAMO43451 1857 aa18.83■□□□□ 0.6
ITGB1-204ENST00000417122 FMNL1O95466 1100 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-204ENST00000417122 OSBPP22059 807 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 EVX2Q03828 476 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 ABCB5Q2M3G0 1257 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 OTUD7AQ8TE49 926 aaPredicted RBP18.82■□□□□ 0.6
ITGB1-204ENST00000417122 TRIM47Q96LD4 638 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 SLC4A4Q9Y6R1 1079 aa18.82■□□□□ 0.6
ITGB1-204ENST00000417122 GLRX3O76003 335 aaKnown RBP18.81■□□□□ 0.6
ITGB1-204ENST00000417122 CYP2D6P10635 497 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 MX1P20591 662 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 HOXD10P28358 340 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 PRMT2P55345 433 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 RAB3GAP1Q15042 981 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 PI4K2BQ8TCG2 481 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 ARMC5Q96C12 935 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 DDRGK1Q96HY6 314 aa18.81■□□□□ 0.6
ITGB1-204ENST00000417122 MYH8P13535 1937 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 RNF113AO15541 343 aaKnown RBP18.8■□□□□ 0.6
ITGB1-204ENST00000417122 FCGRTP55899 365 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 SLC9C1Q4G0N8 1177 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 NBPF11Q86T75 865 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 ANKRD13CQ8N6S4 541 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
ITGB1-204ENST00000417122 SRRDQ9UH36 339 aa18.8■□□□□ 0.6
ITGB1-204ENST00000417122 SALL3Q9BXA9 1300 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 ZFYP08048 801 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-204ENST00000417122 HOXA7P31268 230 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-204ENST00000417122 GCLCP48506 637 aaPredicted RBP18.79■□□□□ 0.6
ITGB1-204ENST00000417122 USP17L2Q6R6M4 530 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 AMOTL1Q8IY63 956 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 APPBP2Q92624 585 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 DYNLL2Q96FJ2 89 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 SWAP70Q9UH65 585 aa18.79■□□□□ 0.6
ITGB1-204ENST00000417122 MYPNQ86TC9 1320 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 USP17L12C9JPN9 530 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 USP17L21D6R901 530 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 IRX3P78415 501 aaPredicted RBP18.78■□□□□ 0.6
ITGB1-204ENST00000417122 FAM110CQ1W6H9 321 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 LRRFIP1Q32MZ4 808 aaKnown RBP18.78■□□□□ 0.6
ITGB1-204ENST00000417122 C12orf60Q5U649 245 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 SLC44A5Q8NCS7 719 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 EXOC6Q8TAG9 804 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 OSBP2Q969R2 916 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 ZNF333Q96JL9 665 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 STRBPQ96SI9 672 aaKnown RBP18.78■□□□□ 0.6
ITGB1-204ENST00000417122 FEZ1Q99689 392 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 EMILIN3Q9NT22 766 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 TAOK2Q9UL54 1235 aa18.78■□□□□ 0.6
ITGB1-204ENST00000417122 CYP2D7A0A087X1C5 515 aa18.77■□□□□ 0.6
ITGB1-204ENST00000417122 MPHOSPH10O00566 681 aaKnown RBP18.77■□□□□ 0.6
ITGB1-204ENST00000417122 GUCY1A2P33402 732 aa18.77■□□□□ 0.6
ITGB1-204ENST00000417122 SEPT2Q15019 361 aa18.77■□□□□ 0.6
ITGB1-204ENST00000417122 ZYXQ15942 572 aaKnown RBP18.77■□□□□ 0.6
ITGB1-204ENST00000417122 RAET1EQ8TD07 263 aa18.77■□□□□ 0.6
ITGB1-204ENST00000417122 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.6
ITGB1-204ENST00000417122 SUPT16HQ9Y5B9 1047 aaKnown RBP18.77■□□□□ 0.6
ITGB1-204ENST00000417122 RBBP6Q7Z6E9 1792 aaKnown RBP18.76■□□□□ 0.59
ITGB1-204ENST00000417122 USP14P54578 494 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 PRKCZQ05513 592 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 CTR9Q6PD62 1173 aa18.76■□□□□ 0.59
ITGB1-204ENST00000417122 ACER1Q8TDN7 264 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms