RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 TTC6Q86TZ1 520 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 CCDC84Q86UT8 332 aaPredicted RBP16.28■□□□□ 0.2
LINC01398-201ENST00000416581 DEFB118Q96PH6 123 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC01398-201ENST00000416581 EHD4Q9H223 541 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 DBNLQ9UJU6 430 aaKnown RBP16.28■□□□□ 0.2
LINC01398-201ENST00000416581 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
LINC01398-201ENST00000416581 MYH1P12882 1939 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 RPTORQ8N122 1335 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 ZBTB7BO15156 539 aaPredicted RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 IDH1O75874 414 aaKnown RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 XRCC5P13010 732 aaKnown RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 CYP7A1P22680 504 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 MAPK4P31152 587 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 ZAP70P43403 619 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 USP5P45974 858 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 CRISPLD2Q9H0B8 497 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 CHMP4BQ9H444 224 aaKnown RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 HMX1Q9NP08 348 aaPredicted RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.27■□□□□ 0.2
LINC01398-201ENST00000416581 DOCK3Q8IZD9 2030 aa16.27■□□□□ 0.2
LINC01398-201ENST00000416581 BRCA2P51587 3418 aa16.27■□□□□ 0.19
LINC01398-201ENST00000416581 EVI5O60447 810 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 SLURP2P0DP57 97 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 USP14P54578 494 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 CHRDL2Q6WN34 429 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 NECAB2Q7Z6G3 386 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 NUDT12Q9BQG2 462 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 SERPINB13Q9UIV8 391 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
LINC01398-201ENST00000416581 MYO5AQ9Y4I1 1855 aaKnown RBP16.25■□□□□ 0.19
LINC01398-201ENST00000416581 HMMRO75330 724 aa16.25■□□□□ 0.19
LINC01398-201ENST00000416581 GLRX3O76003 335 aaKnown RBP16.25■□□□□ 0.19
LINC01398-201ENST00000416581 HERVK_113P62684 666 aa16.25■□□□□ 0.19
LINC01398-201ENST00000416581 CCNA1P78396 465 aa16.25■□□□□ 0.19
LINC01398-201ENST00000416581 FEZ1Q99689 392 aa16.25■□□□□ 0.19
LINC01398-201ENST00000416581 DNAJC18Q9H819 358 aa16.25■□□□□ 0.19
LINC01398-201ENST00000416581 MKI67P46013 3256 aaKnown RBP16.25■□□□□ 0.19
LINC01398-201ENST00000416581 ZBED9Q6R2W3 1325 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 CEP85Q6P2H3 762 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 ADGRA1Q86SQ6 560 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 EAF2Q96CJ1 260 aaPredicted RBP16.24■□□□□ 0.19
LINC01398-201ENST00000416581 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 C1orf115Q9H7X2 142 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
LINC01398-201ENST00000416581 CABP5Q9NP86 173 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
LINC01398-201ENST00000416581 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
LINC01398-201ENST00000416581 TRIOBPQ9H2D6 2365 aa16.23■□□□□ 0.19
LINC01398-201ENST00000416581 RRP1BQ14684 758 aaKnown RBP16.23■□□□□ 0.19
LINC01398-201ENST00000416581 TATDN1Q6P1N9 297 aa16.23■□□□□ 0.19
LINC01398-201ENST00000416581 AACSQ86V21 672 aa16.23■□□□□ 0.19
LINC01398-201ENST00000416581 CLASRPQ8N2M8 674 aaKnown RBP16.23■□□□□ 0.19
LINC01398-201ENST00000416581 MAGEB6Q8N7X4 407 aa16.23■□□□□ 0.19
LINC01398-201ENST00000416581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
LINC01398-201ENST00000416581 CCDC8Q9H0W5 538 aaPredicted RBP16.23■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L15C9J2P7 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L13C9JLJ4 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L11C9JVI0 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L18D6R9N7 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L22D6RA61 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L17D6RBQ6 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L19D6RCP7 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L20D6RJB6 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 GDF11O95390 407 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 ZKSCAN1P17029 563 aaPredicted RBP16.22■□□□□ 0.19
LINC01398-201ENST00000416581 RGS2P41220 211 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 ERVK-9P63128 1117 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 ERVK-24P63145 666 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 USP17L24Q0WX57 530 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 NBPF3Q9H094 633 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 KIAA1683Q9H0B3 1180 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
LINC01398-201ENST00000416581 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
LINC01398-201ENST00000416581 GH2P01242 217 aa16.21■□□□□ 0.19
LINC01398-201ENST00000416581 RPAP2Q8IXW5 612 aaPredicted RBP16.21■□□□□ 0.19
LINC01398-201ENST00000416581 KIF1BPQ96EK5 621 aa16.21■□□□□ 0.19
LINC01398-201ENST00000416581 P2RX7Q99572 595 aaKnown RBP16.21■□□□□ 0.19
LINC01398-201ENST00000416581 APBA2Q99767 749 aa16.21■□□□□ 0.19
LINC01398-201ENST00000416581 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
LINC01398-201ENST00000416581 TLR7Q9NYK1 1049 aaKnown RBP16.21■□□□□ 0.19
LINC01398-201ENST00000416581 RBM27Q9P2N5 1060 aaKnown RBP16.21■□□□□ 0.19
LINC01398-201ENST00000416581 RABGAP1Q9Y3P9 1069 aa16.21■□□□□ 0.19
LINC01398-201ENST00000416581 PLXNB2O15031 1838 aa16.21■□□□□ 0.19
LINC01398-201ENST00000416581 DDX60LQ5H9U9 1706 aaKnown RBP16.2■□□□□ 0.18
LINC01398-201ENST00000416581 RLBP1P12271 317 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 DYNLL1P63167 89 aaKnown RBP16.2■□□□□ 0.18
LINC01398-201ENST00000416581 ABCB5Q2M3G0 1257 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 CERKLQ49MI3 558 aaPredicted RBP16.2■□□□□ 0.18
LINC01398-201ENST00000416581 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 LBX2Q6XYB7 198 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 MIGA1Q8NAN2 632 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 PAWRQ96IZ0 340 aaKnown RBP16.2■□□□□ 0.18
LINC01398-201ENST00000416581 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
LINC01398-201ENST00000416581 MAGEB6P1A0A0J9YX57 407 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms