RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 CBX7O95931 251 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 SRFP11831 508 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 NFIXQ14938 502 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 ZBTB37Q5TC79 503 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 TMPRSS7Q7RTY8 843 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 MFSD2AQ8NA29 543 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 DMRTB1Q96MA1 342 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 CNOT6Q9ULM6 557 aaKnown RBP6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 JAG2Q9Y219 1238 aa6.18□□□□□ -1.42
TRAPPC13-203ENST00000415825 KIR3DL1P43629 444 aa6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 LLGL2Q6P1M3 1020 aa6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 OXR1Q8N573 874 aa6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 EPS8L3Q8TE67 593 aaKnown RBP6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 FAM129BQ96TA1 746 aa6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 KRTAP9-3Q9BYQ3 159 aa6.17□□□□□ -1.42
TRAPPC13-203ENST00000415825 PRAMEF27A3QJZ7 478 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 SEMA7AO75326 666 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 SASH1O94885 1247 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 HDXQ7Z353 690 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 BCO2Q9BYV7 579 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 KCNK12Q9HB15 430 aa6.16□□□□□ -1.42
TRAPPC13-203ENST00000415825 ETF1P62495 437 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 ZNF252P-AS1Q0IIN9 211 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 SCARA3Q6AZY7 606 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 PHLDB3Q6NSJ2 640 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 LILRA2Q8N149 483 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 BAHD1Q8TBE0 780 aaPredicted RBP6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 STK35Q8TDR2 534 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 TRIT1Q9H3H1 467 aaKnown RBP6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 CAPN6Q9Y6Q1 641 aa6.15□□□□□ -1.42
TRAPPC13-203ENST00000415825 CNTNAP4Q9C0A0 1308 aa6.15□□□□□ -1.43
TRAPPC13-203ENST00000415825 PRR33A8MZF0 331 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 SLITRK5O94991 958 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 ZNF605Q86T29 641 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 IRF2BP1Q8IU81 584 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 CREG2Q8IUH2 290 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 DHX38Q92620 1227 aaKnown RBP6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 C20orf173Q96LM9 149 aa6.14□□□□□ -1.43
TRAPPC13-203ENST00000415825 DNAJC25-GNG10A0A024R161 153 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 HPXP02790 462 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 LMNB1P20700 586 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 GSTT1P30711 240 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 PDE6BP35913 854 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 DLG4P78352 724 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 CYP8B1Q9UNU6 501 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 ST14Q9Y5Y6 855 aa6.13□□□□□ -1.43
TRAPPC13-203ENST00000415825 PEX10O60683 326 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 NTF4P34130 210 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 RALGPS1Q5JS13 557 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 TPTE2Q6XPS3 522 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 UBE3DQ7Z6J8 389 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 PRRT2Q7Z6L0 340 aaPredicted RBP6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 HID1Q8IV36 788 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 PDZD8Q8NEN9 1154 aa6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 PIWIL2Q8TC59 973 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 CWC22Q9HCG8 908 aaKnown RBP6.12□□□□□ -1.43
TRAPPC13-203ENST00000415825 FITM1A5D6W6 292 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 GPR182O15218 404 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 RING1Q06587 406 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 SPPL2CQ8IUH8 684 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 NECAB3Q96P71 396 aaPredicted RBP6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 RNF32Q9H0A6 362 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 GPATCH2Q9NW75 528 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 USTQ9Y2C2 406 aa6.11□□□□□ -1.43
TRAPPC13-203ENST00000415825 ARID3CA6NKF2 412 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 CELA3BP08861 270 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 ETV3P41162 512 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 ERVFC1P60507 584 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 ARHGAP4P98171 946 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 DIEXFQ68CQ4 756 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 NXPE4Q6UWF7 544 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 CCDC82Q8N4S0 544 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 GRIN3AQ8TCU5 1115 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 ALKBH8Q96BT7 664 aaKnown RBP6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 SRCIN1Q9C0H9 1055 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 ADAMTS10Q9H324 1103 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 PPM1HQ9ULR3 514 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
TRAPPC13-203ENST00000415825 LTKP29376 864 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 SERPINB4P48594 390 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 CXorf38Q8TB03 319 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 XAGE3Q8WTP9 111 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 WNT10AQ9GZT5 417 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 MCOLN1Q9GZU1 580 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 CACNA2D2Q9NY47 1150 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 RTEL1Q9NZ71 1219 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 DUSP13Q9UII6 198 aa6.09□□□□□ -1.43
TRAPPC13-203ENST00000415825 A0A0G2JLL6 359 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 TEX51A0A1B0GUA7 166 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 TPP2P29144 1249 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 TRHRP34981 398 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 CAP2P40123 477 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 CHRNEQ04844 493 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 TNK2Q07912 1038 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 MPRIPQ6WCQ1 1025 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 MARCH10Q8NA82 808 aaPredicted RBP6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 KCNC2Q96PR1 638 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 KCNH3Q9ULD8 1083 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms