RNA–Protein interactions for RNA: ENST00000415472.6

RBM28-202, Transcript of RNA binding motif protein 28, humanhuman

TSL 2 BASIC

Gene RBM28, Length 2,251 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-202ENST00000415472 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 CELF1Q92879 486 aaKnown RBP13.41□□□□□ -0.26
RBM28-202ENST00000415472 MED15Q96RN5 788 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 FOXP1Q9H334 677 aaPredicted RBP13.41□□□□□ -0.26
RBM28-202ENST00000415472 MAN1B1Q9UKM7 699 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 LAMB2P55268 1798 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 UBASH3AP57075 661 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 FUT2Q10981 343 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 SAFBQ15424 915 aaKnown RBP eCLIP13.41□□□□□ -0.26
RBM28-202ENST00000415472 CCDC24Q8N4L8 307 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 WASF1Q92558 559 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 FAM84BQ96KN1 310 aaPredicted RBP13.41□□□□□ -0.26
RBM28-202ENST00000415472 KCND1Q9NSA2 647 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 MINPP1Q9UNW1 487 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 A0A1B0GUL6 1792 aa13.41□□□□□ -0.26
RBM28-202ENST00000415472 COL22A1Q8NFW1 1626 aaPredicted RBP13.4□□□□□ -0.26
RBM28-202ENST00000415472 A0A087X0B3 334 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 NMT2O60551 498 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 SERPINC1P01008 464 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 TPM4P67936 248 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 TRMT44Q8IYL2 757 aaKnown RBP13.4□□□□□ -0.26
RBM28-202ENST00000415472 CCDC150Q8NCX0 1101 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 CSRNP2Q9H175 543 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 DNAJC5Q9H3Z4 198 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 CASZ1Q86V15 1759 aa13.4□□□□□ -0.26
RBM28-202ENST00000415472 NUTM2BA6NNL0 878 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 NUTM2EB1AL46 878 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 POSTNQ15063 836 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 CFAP100Q494V2 611 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 NUTM2AQ8IVF1 878 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 ANKRD18AQ8IVF6 992 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 CDC5LQ99459 802 aaKnown RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 RNF41Q9H4P4 317 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 ANAPC4Q9UJX5 808 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 MYH13Q9UKX3 1938 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 ADAMTS3O15072 1205 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 CASP1P29466 404 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 RILPL1Q5EBL4 403 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 ESR2Q92731 530 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 ZSCAN10Q96SZ4 725 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 JAG2Q9Y219 1238 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 V9GY48 417 aaPredicted RBP13.39□□□□□ -0.27
RBM28-202ENST00000415472 NRAPQ86VF7 1730 aa13.39□□□□□ -0.27
RBM28-202ENST00000415472 FANCGO15287 622 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 ACTN4O43707 911 aaKnown RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 VEGFAP15692 232 aaPredicted RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 TMTC2Q8N394 836 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 DUOX1Q9NRD9 1551 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 CCDC196A0A1B0GTZ2 297 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 SARSP49591 514 aaKnown RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 SLC4A8Q2Y0W8 1093 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 TBC1D9BQ66K14 1250 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 CTR9Q6PD62 1173 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 VSTM4Q8IW00 320 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 CDCA7Q9BWT1 371 aaPredicted RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 BSDC1Q9NW68 430 aaPredicted RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 TFCP2L1Q9NZI6 479 aa13.38□□□□□ -0.27
RBM28-202ENST00000415472 SRPRBQ9Y5M8 271 aaKnown RBP13.38□□□□□ -0.27
RBM28-202ENST00000415472 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 USP17L21D6R901 530 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 CYP2D6P10635 497 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 TROAPQ12815 778 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 SF3B3Q15393 1217 aaKnown RBP13.37□□□□□ -0.27
RBM28-202ENST00000415472 NPY5RQ15761 445 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 AHDC1Q5TGY3 1603 aaPredicted RBP13.37□□□□□ -0.27
RBM28-202ENST00000415472 UBE4AQ14139 1066 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 MORC3Q14149 939 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 IFIT1BQ5T764 474 aaKnown RBP13.37□□□□□ -0.27
RBM28-202ENST00000415472 NT5DC1Q5TFE4 455 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 KIF18AQ8NI77 898 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 RNF26Q9BY78 433 aaPredicted RBP13.37□□□□□ -0.27
RBM28-202ENST00000415472 SRP68Q9UHB9 627 aaKnown RBP13.37□□□□□ -0.27
RBM28-202ENST00000415472 NFE2L3Q9Y4A8 694 aa13.37□□□□□ -0.27
RBM28-202ENST00000415472 COL5A3P25940 1745 aaPredicted RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 MECOMQ03112 1051 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 SYCP1Q15431 976 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 FAM47AQ5JRC9 791 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 DHX58Q96C10 678 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 NSUN4Q96CB9 384 aaKnown RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 MTA3Q9BTC8 594 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 TMX1Q9H3N1 280 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 SAMSN1Q9NSI8 373 aaKnown RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 GNL3LQ9NVN8 582 aaKnown RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 AATFQ9NY61 560 aaKnown RBP eCLIP13.36□□□□□ -0.27
RBM28-202ENST00000415472 ZNF652Q9Y2D9 606 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 PSDA5PKW4 1024 aaPredicted RBP13.36□□□□□ -0.27
RBM28-202ENST00000415472 NPHP1O15259 732 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 ZNF18P17022 549 aa13.36□□□□□ -0.27
RBM28-202ENST00000415472 PRDX5P30044 214 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms