RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.26
RFFL-205ENST00000415395 DNM1Q05193 864 aaKnown RBP13.43□□□□□ -0.26
RFFL-205ENST00000415395 WTAPQ15007 396 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 RRP12Q5JTH9 1297 aaKnown RBP13.43□□□□□ -0.26
RFFL-205ENST00000415395 APOA5Q6Q788 366 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 IQCA1Q86XH1 822 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
RFFL-205ENST00000415395 FAM200AQ8TCP9 573 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 SERPINA10Q9UK55 444 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 HPS5Q9UPZ3 1129 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 FLT1P17948 1338 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 ADAMTSL1Q8N6G6 1762 aa13.43□□□□□ -0.26
RFFL-205ENST00000415395 CYP2D7A0A087X1C5 515 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 CCDC69A6NI79 296 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 USP17L8P0C7I0 530 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 PTGER2P43116 358 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 CRKP46108 304 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 PPP2R5BQ15173 497 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 CCDC178Q5BJE1 867 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 SYNE3Q6ZMZ3 975 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 INCENPQ9NQS7 918 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
RFFL-205ENST00000415395 TAOK2Q9UL54 1235 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 NAP1L2Q9ULW6 460 aaPredicted RBP13.42□□□□□ -0.26
RFFL-205ENST00000415395 ZBTB43O43298 467 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 CDKL5O76039 1030 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
RFFL-205ENST00000415395 METAP2P50579 478 aaKnown RBP eCLIP13.42□□□□□ -0.26
RFFL-205ENST00000415395 CPLX2Q6PUV4 134 aaKnown RBP13.42□□□□□ -0.26
RFFL-205ENST00000415395 NFXL1Q6ZNB6 911 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 LARGE2Q8N3Y3 721 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 NKX2-3Q8TAU0 364 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 SLC12A7Q9Y666 1083 aa13.42□□□□□ -0.26
RFFL-205ENST00000415395 LTBP3Q9NS15 1303 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 MYH8P13535 1937 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 PTPDC1A2A3K4 754 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 YDJCA8MPS7 323 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 CTDNEP1O95476 244 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 IARSP41252 1262 aaKnown RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 CCT2P78371 535 aaKnown RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 SEC23AQ15436 765 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 APOBEC3HQ6NTF7 200 aaKnown RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 MAPKAPK5Q8IW41 473 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 ZSCAN10Q96SZ4 725 aaPredicted RBP13.41□□□□□ -0.26
RFFL-205ENST00000415395 MXD3Q9BW11 206 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 KCNQ5Q9NR82 932 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 TNKSO95271 1327 aa13.41□□□□□ -0.26
RFFL-205ENST00000415395 CPLX1O14810 134 aa13.4□□□□□ -0.26
RFFL-205ENST00000415395 RANBP6O60518 1105 aaKnown RBP13.4□□□□□ -0.26
RFFL-205ENST00000415395 VIL1P09327 827 aaKnown RBP13.4□□□□□ -0.26
RFFL-205ENST00000415395 CYP2D6P10635 497 aa13.4□□□□□ -0.26
RFFL-205ENST00000415395 MMP14P50281 582 aa13.4□□□□□ -0.26
RFFL-205ENST00000415395 PLCB2Q00722 1185 aa13.4□□□□□ -0.26
RFFL-205ENST00000415395 TAOK3Q9H2K8 898 aa13.4□□□□□ -0.26
RFFL-205ENST00000415395 CCDC196A0A1B0GTZ2 297 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 JAK2O60674 1132 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 SCNN1DP51172 638 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 CDC42EP5Q6NZY7 148 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 RSBN1LQ6PCB5 846 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 TTC6Q86TZ1 520 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 KIAA0825Q8IV33 1275 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 NIM1KQ8IY84 436 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 SPATA32Q96LK8 384 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 ZSCAN16Q9H4T2 348 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 ZNF277Q9NRM2 450 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 TCP11L1Q9NUJ3 509 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 USP40Q9NVE5 1235 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 ZNRF3Q9ULT6 936 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 COL4A5P29400 1685 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 PSDA5PKW4 1024 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 TSPY2A6NKD2 308 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 CALM1P0DP23 149 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 CALM2P0DP24 149 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 CALM3P0DP25 149 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 STK11IPQ8N1F8 1099 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 ENAHQ8N8S7 591 aaPredicted RBP13.39□□□□□ -0.27
RFFL-205ENST00000415395 MKNK2Q9HBH9 465 aa13.39□□□□□ -0.27
RFFL-205ENST00000415395 MYH15Q9Y2K3 1946 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 COL2A1P02458 1487 aaPredicted RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 SMIM22K7EJ46 135 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 PRDM1O75626 825 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 DDAH1O94760 285 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 PLCD1P51178 756 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 TYRO3Q06418 890 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 IFIT1BQ5T764 474 aaKnown RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 MICU3Q86XE3 530 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 ZNF654Q8IZM8 581 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
RFFL-205ENST00000415395 AGBL3Q8NEM8 1001 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
RFFL-205ENST00000415395 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms