RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 ID3Q02535 119 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 INPP5AQ14642 412 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 TMEM201Q5SNT2 666 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 TAB3Q8N5C8 712 aaPredicted RBP9.75□□□□□ -0.85
LINC00343-202ENST00000415294 TMPRSS13Q9BYE2 586 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 RNF208Q9H0X6 261 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 NOP53Q9NZM5 478 aaKnown RBP9.75□□□□□ -0.85
LINC00343-202ENST00000415294 GMIPQ9P107 970 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 MKL2Q9ULH7 1088 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 TMA7Q9Y2S6 64 aaKnown RBP9.75□□□□□ -0.85
LINC00343-202ENST00000415294 CD109Q6YHK3 1445 aa9.75□□□□□ -0.85
LINC00343-202ENST00000415294 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 SMAD7O15105 426 aaKnown RBP9.74□□□□□ -0.85
LINC00343-202ENST00000415294 FANCGO15287 622 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 DDX3YO15523 660 aaKnown RBP9.74□□□□□ -0.85
LINC00343-202ENST00000415294 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 ELNP15502 786 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 RING1Q06587 406 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 GPAT2Q6NUI2 795 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 IGF2-ASQ6U949 168 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 LINC00114Q6XXX2 140 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 LSRQ86X29 649 aaPredicted RBP9.74□□□□□ -0.85
LINC00343-202ENST00000415294 TMEM40Q8WWA1 233 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 TRIM11Q96F44 468 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 MRPL18Q9H0U6 180 aaKnown RBP9.74□□□□□ -0.85
LINC00343-202ENST00000415294 CYP4F12Q9HCS2 524 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 KCNK4Q9NYG8 393 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 ACTR10Q9NZ32 417 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 SLC12A7Q9Y666 1083 aa9.74□□□□□ -0.85
LINC00343-202ENST00000415294 ZCCHC11Q5TAX3 1644 aaKnown RBP9.73□□□□□ -0.85
LINC00343-202ENST00000415294 K7ELQ4 463 aaPredicted RBP9.73□□□□□ -0.85
LINC00343-202ENST00000415294 TRIM28Q13263 835 aaKnown RBP9.73□□□□□ -0.85
LINC00343-202ENST00000415294 WDR89Q96FK6 387 aaPredicted RBP9.73□□□□□ -0.85
LINC00343-202ENST00000415294 MRFAP1L1Q96HT8 127 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 RUSC1Q9BVN2 902 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 PLVAPQ9BX97 442 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 CFAP43Q8NDM7 1665 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 ARAP3Q8WWN8 1544 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 TNIKQ9UKE5 1360 aa9.73□□□□□ -0.85
LINC00343-202ENST00000415294 WRNQ14191 1432 aaPredicted RBP eCLIP9.72□□□□□ -0.85
LINC00343-202ENST00000415294 UACAQ9BZF9 1416 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 DLGAP3O95886 979 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 CDK8P49336 464 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 PRRT3Q5FWE3 981 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 INTS3Q68E01 1043 aaKnown RBP9.72□□□□□ -0.85
LINC00343-202ENST00000415294 FAM169BQ8N8A8 192 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 SMG8Q8ND04 991 aaKnown RBP9.72□□□□□ -0.85
LINC00343-202ENST00000415294 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
LINC00343-202ENST00000415294 WNT10AQ9GZT5 417 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 ATXN3LQ9H3M9 355 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 REV1Q9UBZ9 1251 aa9.72□□□□□ -0.85
LINC00343-202ENST00000415294 CNTNAP5Q8WYK1 1306 aa9.71□□□□□ -0.85
LINC00343-202ENST00000415294 SMARCA5O60264 1052 aaPredicted RBP9.71□□□□□ -0.86
LINC00343-202ENST00000415294 PLCG1P19174 1290 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 GIMAP6Q6P9H5 292 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 BEND7Q8N7W2 519 aaPredicted RBP9.71□□□□□ -0.86
LINC00343-202ENST00000415294 KCT2Q8NC54 265 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 UBASH3BQ8TF42 649 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 CRIM1Q9NZV1 1036 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 CDK11AQ9UQ88 783 aaPredicted RBP9.71□□□□□ -0.86
LINC00343-202ENST00000415294 WDR7Q9Y4E6 1490 aa9.71□□□□□ -0.86
LINC00343-202ENST00000415294 DCDC2CA8MYV0 355 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 FXNQ16595 210 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 ZBTB37Q5TC79 503 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 ZNF746Q6NUN9 644 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-202ENST00000415294 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 ACAD11Q709F0 780 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 FAM177A1Q8N128 213 aaPredicted RBP9.7□□□□□ -0.86
LINC00343-202ENST00000415294 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 HIF3AQ9Y2N7 669 aa9.7□□□□□ -0.86
LINC00343-202ENST00000415294 TLDC2A0PJX2 215 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 PRAMEF27A3QJZ7 478 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 TMPRSS2O15393 492 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 IGHA1P01876 353 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 GUCY2CP25092 1073 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 ETF1P62495 437 aaKnown RBP9.69□□□□□ -0.86
LINC00343-202ENST00000415294 BMS1Q14692 1282 aaKnown RBP9.69□□□□□ -0.86
LINC00343-202ENST00000415294 CDCP2Q5VXM1 449 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 ANKRD34AQ69YU3 496 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.69□□□□□ -0.86
LINC00343-202ENST00000415294 RNF214Q8ND24 703 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 ZNF507Q8TCN5 953 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 CCDC113Q9H0I3 377 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 PIF1Q9H611 641 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 PICK1Q9NRD5 415 aa9.69□□□□□ -0.86
LINC00343-202ENST00000415294 PREX1Q8TCU6 1659 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 PGRP06401 933 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 GRK4P32298 578 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 YARSP54577 528 aaKnown RBP9.68□□□□□ -0.86
LINC00343-202ENST00000415294 SNRPNP63162 240 aaKnown RBP9.68□□□□□ -0.86
LINC00343-202ENST00000415294 DDR2Q16832 855 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 AKAP4Q5JQC9 854 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 C12orf40Q86WS4 652 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 CNNM2Q9H8M5 875 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 MSRB2Q9Y3D2 182 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 CORINQ9Y5Q5 1042 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 PTPRTO14522 1441 aa9.68□□□□□ -0.86
LINC00343-202ENST00000415294 SLC22A31A6NKX4 558 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms