RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 UTYO14607 1347 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 SPEF2Q9C093 1822 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 C21orf2O43822 256 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 FURINP09958 794 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 CTSWP56202 376 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 PTSQ03393 145 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 GPR162Q16538 588 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.04
LINC00343-201ENST00000414368 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 PRPF40BQ6NWY9 871 aaKnown RBP8.57□□□□□ -1.04
LINC00343-201ENST00000414368 LMBR1LQ6UX01 489 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 DDX46Q7L014 1031 aaKnown RBP8.57□□□□□ -1.04
LINC00343-201ENST00000414368 ITPKCQ96DU7 683 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 RBM17Q96I25 401 aaKnown RBP8.57□□□□□ -1.04
LINC00343-201ENST00000414368 PLA2G12BQ9BX93 195 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 GREM2Q9H772 168 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 ENAMQ9NRM1 1142 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 CHMP3Q9Y3E7 222 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 SUPT16HQ9Y5B9 1047 aaKnown RBP8.57□□□□□ -1.04
LINC00343-201ENST00000414368 ARFGEF1Q9Y6D6 1849 aa8.57□□□□□ -1.04
LINC00343-201ENST00000414368 CNTNAP5Q8WYK1 1306 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CARNS1A5YM72 827 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 TMEM88BA6NKF7 163 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CSF1RP07333 972 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 UBTFL1P0CB47 393 aaPredicted RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 HSP90B1P14625 803 aaKnown RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 ALDH1B1P30837 517 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CCDC152Q4G0S7 254 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 ANKRD44Q8N8A2 993 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CELF1Q92879 486 aaKnown RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CNKSR1Q969H4 720 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CRAMP1Q96RY5 1269 aa8.56□□□□□ -1.04
LINC00343-201ENST00000414368 BICC1Q9H694 974 aaKnown RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 LRRFIP2Q9Y608 721 aaKnown RBP8.56□□□□□ -1.04
LINC00343-201ENST00000414368 CCDC88AQ3V6T2 1871 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 GNRH1P01148 92 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 ADH1AP07327 375 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 ITGA6P23229 1130 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 ADD1P35611 737 aaKnown RBP8.55□□□□□ -1.04
LINC00343-201ENST00000414368 GDF10P55107 478 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 CBLBQ13191 982 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 GRAPQ13588 217 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 PDE3AQ14432 1141 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 SWI5Q1ZZU3 235 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 LINC00528Q8N1L1 170 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 VWA5B2Q8N398 1253 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 BEND7Q8N7W2 519 aaPredicted RBP8.55□□□□□ -1.04
LINC00343-201ENST00000414368 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.55□□□□□ -1.04
LINC00343-201ENST00000414368 GRAPLQ8TC17 118 aaPredicted RBP8.55□□□□□ -1.04
LINC00343-201ENST00000414368 C7orf43Q8WVR3 580 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
LINC00343-201ENST00000414368 BACH1O14867 736 aa8.54□□□□□ -1.04
LINC00343-201ENST00000414368 BBOX1O75936 387 aa8.54□□□□□ -1.04
LINC00343-201ENST00000414368 GNAI3P08754 354 aa8.54□□□□□ -1.04
LINC00343-201ENST00000414368 RPS8P62241 208 aaKnown RBP8.54□□□□□ -1.04
LINC00343-201ENST00000414368 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
LINC00343-201ENST00000414368 ARHGEF10LQ9HCE6 1279 aa8.54□□□□□ -1.04
LINC00343-201ENST00000414368 ZNF358Q9NW07 568 aa8.54□□□□□ -1.04
LINC00343-201ENST00000414368 FER1L6Q2WGJ9 1857 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 RTL9Q8NET4 1388 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 ANKRD18BA2A2Z9 1011 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 GNAI2P04899 355 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 IFIT5Q13325 482 aaKnown RBP8.53□□□□□ -1.04
LINC00343-201ENST00000414368 RABL6Q3YEC7 729 aaPredicted RBP8.53□□□□□ -1.04
LINC00343-201ENST00000414368 SV2AQ7L0J3 742 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 ANKRD18AQ8IVF6 992 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 CCDC155Q8N6L0 562 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 KLHDC4Q8TBB5 520 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 RAB6BQ9NRW1 208 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 SERTAD1Q9UHV2 236 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 ATP6V0A2Q9Y487 856 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 SBF1O95248 1867 aa8.53□□□□□ -1.04
LINC00343-201ENST00000414368 WTIPA6NIX2 430 aaPredicted RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 GRIN3BO60391 1043 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 DKK1O94907 266 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 BRD1O95696 1058 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 INHAP05111 366 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CELA2BP08218 269 aaPredicted RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 PRELPP51888 382 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 IRX6P78412 446 aaPredicted RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 RELBQ01201 579 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CCDC57Q2TAC2 916 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 Q6ZVU0 165 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 PODNQ7Z5L7 613 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 SP8Q8IXZ3 490 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 TSEN2Q8NCE0 465 aaKnown RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CRBNQ96SW2 442 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CDC5LQ99459 802 aaKnown RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 PUS3Q9BZE2 481 aaKnown RBP8.52□□□□□ -1.05
LINC00343-201ENST00000414368 ETNK1Q9HBU6 452 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 ZBTB40Q9NUA8 1239 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 DDX19BQ9UMR2 479 aa8.52□□□□□ -1.05
LINC00343-201ENST00000414368 CHD4Q14839 1912 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 PNMA6EA0A0J9YXQ4 647 aa8.51□□□□□ -1.05
LINC00343-201ENST00000414368 CDC14CA4D256 554 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms