RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 PFASO15067 1338 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 C19orf81C9J6K1 198 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 BAG3O95817 575 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 CYP2E1P05181 493 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-210ENST00000413578 PLCG2P16885 1265 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 IRX3P78415 501 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-210ENST00000413578 TNNI3KQ59H18 835 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 NAA16Q6N069 864 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-210ENST00000413578 GPR153Q6NV75 609 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 ATF7IPQ6VMQ6 1270 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 MAPKAPK5Q8IW41 473 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 C7orf61Q8IZ16 206 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 GPRC5AQ8NFJ5 357 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 TGFBRAP1Q8WUH2 860 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 C11orf49Q9H6J7 331 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 SNRKQ9NRH2 765 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 ZBTB21Q9ULJ3 1066 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 ZMYND8Q9ULU4 1186 aaPredicted RBP14.95□□□□□ -0.02
LIMS2-210ENST00000413578 FPGT-TNNI3KV9GXZ4 949 aa14.95□□□□□ -0.02
LIMS2-210ENST00000413578 USP17L10C9JJH3 530 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 COL6A1P12109 1028 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 PRKAR2AP13861 404 aaKnown RBP14.94□□□□□ -0.02
LIMS2-210ENST00000413578 Q3C1V9 767 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 NUDT12Q9BQG2 462 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 DBNDD2Q9BQY9 259 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 EMILIN3Q9NT22 766 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 TMOD4Q9NZQ9 345 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 PALD1Q9ULE6 856 aa14.94□□□□□ -0.02
LIMS2-210ENST00000413578 IPO8O15397 1037 aaKnown RBP14.93□□□□□ -0.02
LIMS2-210ENST00000413578 GDF11O95390 407 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 CYP2B6P20813 491 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 MAPK4P31152 587 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 ERVK-9P63128 1117 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 ERVK-24P63145 666 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 LRIT3Q3SXY7 679 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 MORN1Q5T089 497 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 SSH3Q8TE77 659 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 PORCNQ9H237 461 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 ATAD5Q96QE3 1844 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 MAST2Q6P0Q8 1798 aa14.93□□□□□ -0.02
LIMS2-210ENST00000413578 CUL9Q8IWT3 2517 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 BCAR3O75815 825 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 MAGEA10P43363 369 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 ZAP70P43403 619 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 CACNB2Q08289 660 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 TTC39AQ5SRH9 613 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 LHX8Q68G74 356 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 GPR142Q7Z601 462 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 TRMT44Q8IYL2 757 aaKnown RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 GTF3C2Q8WUA4 911 aaPredicted RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 C12orf42Q96LP6 360 aa14.92□□□□□ -0.02
LIMS2-210ENST00000413578 NOL10Q9BSC4 688 aaKnown RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 PIH1D3Q9NQM4 214 aaKnown RBP14.92□□□□□ -0.02
LIMS2-210ENST00000413578 CNMDO75829 334 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 SYN1P17600 705 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 DYNLL1P63167 89 aaKnown RBP14.91□□□□□ -0.02
LIMS2-210ENST00000413578 CCL14Q16627 93 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 CCDC158Q5M9N0 1113 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 TATDN1Q6P1N9 297 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 TMEM57Q8N5G2 664 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 SLC17A8Q8NDX2 589 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 NOP58Q9Y2X3 529 aaKnown RBP14.91□□□□□ -0.02
LIMS2-210ENST00000413578 DDX60LQ5H9U9 1706 aaKnown RBP14.91□□□□□ -0.02
LIMS2-210ENST00000413578 A0A0C4DFX4 3053 aa14.91□□□□□ -0.02
LIMS2-210ENST00000413578 ZKSCAN1P17029 563 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-210ENST00000413578 CCND3P30281 292 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-210ENST00000413578 RGS2P41220 211 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 PDE3AQ14432 1141 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 PLEKHH3Q7Z736 793 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 TDHQ8IZJ6 230 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 CRACR2BQ8N4Y2 399 aaPredicted RBP14.9□□□□□ -0.02
LIMS2-210ENST00000413578 CLUAP1Q96AJ1 413 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 APBA2Q99767 749 aa14.9□□□□□ -0.02
LIMS2-210ENST00000413578 TLR7Q9NYK1 1049 aaKnown RBP14.9□□□□□ -0.02
LIMS2-210ENST00000413578 DBNLQ9UJU6 430 aaKnown RBP14.9□□□□□ -0.02
LIMS2-210ENST00000413578 GH2P01242 217 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 IGHA2P01877 340 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 HLA-DOAP06340 250 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 USP17L2Q6R6M4 530 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 FRAT1Q92837 279 aaPredicted RBP14.89□□□□□ -0.03
LIMS2-210ENST00000413578 EHD4Q9H223 541 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
LIMS2-210ENST00000413578 RABGAP1Q9Y3P9 1069 aa14.89□□□□□ -0.03
LIMS2-210ENST00000413578 FOCADQ5VW36 1801 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 CCER2I3L3R5 266 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 DLL1O00548 723 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 CYP7A1P22680 504 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 MAP2K5Q13163 448 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 LRRC26Q2I0M4 334 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 LBX2Q6XYB7 198 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 DEFB123Q8N688 67 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 PAGR1Q9BTK6 254 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 TRIM34Q9BYJ4 488 aa14.88□□□□□ -0.03
LIMS2-210ENST00000413578 CDK5RAP2Q96SN8 1893 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
LIMS2-210ENST00000413578 HOXC6P09630 235 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 CATSPERGQ6ZRH7 1159 aa14.87□□□□□ -0.03
LIMS2-210ENST00000413578 Q7L0L9 218 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms