RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 DYNLL2Q96FJ2 89 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 SLC4A4Q9Y6R1 1079 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 MPHOSPH10O00566 681 aaKnown RBP12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 PEX10O60683 326 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 SHMT1P34896 483 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 RGS19P49795 217 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 BACE1P56817 501 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 UBE3CQ15386 1083 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 ABCB5Q2M3G0 1257 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 B4GALNT3Q6L9W6 998 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 STK11IPQ8N1F8 1099 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 ANKRD13CQ8N6S4 541 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 SH3TC2Q8TF17 1288 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 TRIM47Q96LD4 638 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 WDR18Q9BV38 432 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 TMOD4Q9NZQ9 345 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 ADGRA2Q96PE1 1338 aa12.27□□□□□ -0.45
NCKIPSD-202ENST00000413374 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 USP17L12C9JPN9 530 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 USP17L21D6R901 530 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 BCRP11274 1271 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 OSBPP22059 807 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 IRX6P78412 446 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 SH3D19Q5HYK7 790 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 KBTBD3Q8NAB2 608 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 ACER1Q8TDN7 264 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 OSBP2Q969R2 916 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 ASCC2Q9H1I8 757 aaPredicted RBP12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 EHD4Q9H223 541 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 CABP5Q9NP86 173 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 EMILIN3Q9NT22 766 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 SLC45A1Q9Y2W3 748 aa12.26□□□□□ -0.45
NCKIPSD-202ENST00000413374 RNF113AO15541 343 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 IGHDP01880 384 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 SEPT2Q15019 361 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 SLC9C1Q4G0N8 1177 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 STRBPQ96SI9 672 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 FEZ1Q99689 392 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 PNMA3Q9UL41 463 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 GABRQQ9UN88 632 aa12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 MYO5AQ9Y4I1 1855 aaKnown RBP12.25□□□□□ -0.45
NCKIPSD-202ENST00000413374 POTEFA5A3E0 1075 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 C19orf81C9J6K1 198 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 ERC2O15083 957 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 MX1P20591 662 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 HOXD10P28358 340 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 GUCY1A2P33402 732 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 FCGRTP55899 365 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 IRX3P78415 501 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 GABPAQ06546 454 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 PABPC4Q13310 644 aaKnown RBP eCLIP12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 HDAC1Q13547 482 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 USP17L2Q6R6M4 530 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 RAET1EQ8TD07 263 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 DOCK2Q92608 1830 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 GCC1Q96CN9 775 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 DDRGK1Q96HY6 314 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 FSD1Q9BTV5 496 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 RWDD1Q9H446 243 aaPredicted RBP12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 GINM1Q9NU53 330 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 SRRDQ9UH36 339 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 TAOK2Q9UL54 1235 aa12.24□□□□□ -0.45
NCKIPSD-202ENST00000413374 MYPNQ86TC9 1320 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 MINDY4BA8MYZ0 360 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 M0R2C6 588 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 GLRX3O76003 335 aaKnown RBP12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 APPP05067 770 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 AKR1B1P15121 316 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 CDK8P49336 464 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 PRKCZQ05513 592 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 NBPF11Q86T75 865 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 AMOTL1Q8IY63 956 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 APPBP2Q92624 585 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 LNPKQ9C0E8 428 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
NCKIPSD-202ENST00000413374 GSG1L2A8MUP6 293 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 TNPO2O14787 897 aaKnown RBP12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 GPAA1O43292 621 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 GNRH1P01148 92 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 EN2P19622 333 aaPredicted RBP12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 CLEC10AQ8IUN9 316 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 ARMC5Q96C12 935 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 ZNF333Q96JL9 665 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 PAGR1Q9BTK6 254 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 TMEM106CQ9BVX2 250 aa12.22□□□□□ -0.45
NCKIPSD-202ENST00000413374 SWAP70Q9UH65 585 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms