RNA–Protein interactions for RNA: ENST00000413081.1

TNRC18-204, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 925 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-204ENST00000413081 STXBP5LQ9Y2K9 1186 aa23.13■■□□□ 1.29
TNRC18-204ENST00000413081 PFASO15067 1338 aa23.12■■□□□ 1.29
TNRC18-204ENST00000413081 C19orf81C9J6K1 198 aa23.12■■□□□ 1.29
TNRC18-204ENST00000413081 BAG3O95817 575 aa23.12■■□□□ 1.29
TNRC18-204ENST00000413081 HOXA7P31268 230 aaPredicted RBP23.12■■□□□ 1.29
TNRC18-204ENST00000413081 CRACR2BQ8N4Y2 399 aaPredicted RBP23.12■■□□□ 1.29
TNRC18-204ENST00000413081 CWC22Q9HCG8 908 aaKnown RBP23.12■■□□□ 1.29
TNRC18-204ENST00000413081 SIPA1L1O43166 1804 aa23.12■■□□□ 1.29
TNRC18-204ENST00000413081 MAST2Q6P0Q8 1798 aa23.12■■□□□ 1.29
TNRC18-204ENST00000413081 PLCG2P16885 1265 aa23.11■■□□□ 1.29
TNRC18-204ENST00000413081 TXNRD2Q9NNW7 524 aa23.11■■□□□ 1.29
TNRC18-204ENST00000413081 AATFQ9NY61 560 aaKnown RBP eCLIP23.11■■□□□ 1.29
TNRC18-204ENST00000413081 USP17L10C9JJH3 530 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 PEX10O60683 326 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 UQCRFS1P1P0C7P4 283 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 RGS2P41220 211 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 MCAMP43121 646 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 CACNB2Q08289 660 aaPredicted RBP23.1■■□□□ 1.29
TNRC18-204ENST00000413081 MTX1Q13505 466 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 NAA16Q6N069 864 aaPredicted RBP23.1■■□□□ 1.29
TNRC18-204ENST00000413081 GTF3C2Q8WUA4 911 aaPredicted RBP23.1■■□□□ 1.29
TNRC18-204ENST00000413081 PAGR1Q9BTK6 254 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 MTMR10Q9NXD2 777 aa23.1■■□□□ 1.29
TNRC18-204ENST00000413081 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.1■■□□□ 1.29
TNRC18-204ENST00000413081 GDF11O95390 407 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 ERVK-9P63128 1117 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 ERVK-24P63145 666 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 MAPKAPK5Q8IW41 473 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 GINM1Q9NU53 330 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 CUL9Q8IWT3 2517 aa23.09■■□□□ 1.29
TNRC18-204ENST00000413081 G3BP1Q13283 466 aaKnown RBP eCLIP23.08■■□□□ 1.299e-8■□□□□ 10.6
TNRC18-204ENST00000413081 TGFBRAP1Q8WUH2 860 aa23.08■■□□□ 1.29
TNRC18-204ENST00000413081 APBA2Q99767 749 aa23.08■■□□□ 1.29
TNRC18-204ENST00000413081 RBPJLQ9UBG7 517 aa23.08■■□□□ 1.29
TNRC18-204ENST00000413081 CDK5RAP2Q96SN8 1893 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 COL6A1P12109 1028 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 CCND3P30281 292 aaPredicted RBP23.07■■□□□ 1.28
TNRC18-204ENST00000413081 GPR142Q7Z601 462 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 PLEKHH3Q7Z736 793 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 FOXP4Q8IVH2 680 aaPredicted RBP23.07■■□□□ 1.28
TNRC18-204ENST00000413081 PORCNQ9H237 461 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 ZBTB21Q9ULJ3 1066 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 FOCADQ5VW36 1801 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 FLT1P17948 1338 aa23.07■■□□□ 1.28
TNRC18-204ENST00000413081 JAG1P78504 1218 aa23.06■■□□□ 1.28
TNRC18-204ENST00000413081 MDM2Q00987 491 aaPredicted RBP23.06■■□□□ 1.28
TNRC18-204ENST00000413081 CCL14Q16627 93 aa23.06■■□□□ 1.28
TNRC18-204ENST00000413081 LRRC26Q2I0M4 334 aa23.06■■□□□ 1.28
TNRC18-204ENST00000413081 TTC39AQ5SRH9 613 aa23.06■■□□□ 1.28
TNRC18-204ENST00000413081 TRMT2AQ8IZ69 625 aaKnown RBP23.06■■□□□ 1.28
TNRC18-204ENST00000413081 DNAJC18Q9H819 358 aa23.06■■□□□ 1.28
TNRC18-204ENST00000413081 HLA-DOAP06340 250 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 Q3C1V9 767 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 MORN1Q5T089 497 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 USP17L2Q6R6M4 530 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 ATF7IPQ6VMQ6 1270 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 USP6NLQ92738 828 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 SNRKQ9NRH2 765 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 PALD1Q9ULE6 856 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 FRMPD3Q5JV73 1810 aa23.05■■□□□ 1.28
TNRC18-204ENST00000413081 GLRX3O76003 335 aaKnown RBP23.04■■□□□ 1.28
TNRC18-204ENST00000413081 PPP4CP60510 307 aa23.04■■□□□ 1.28
TNRC18-204ENST00000413081 SHROOM1Q2M3G4 852 aaPredicted RBP23.04■■□□□ 1.28
TNRC18-204ENST00000413081 LHX8Q68G74 356 aa23.04■■□□□ 1.28
TNRC18-204ENST00000413081 METTL16Q86W50 562 aaKnown RBP23.04■■□□□ 1.28
TNRC18-204ENST00000413081 GNAI2P04899 355 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 CCNA1P78396 465 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 MAP2K5Q13163 448 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 CCDC158Q5M9N0 1113 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 WDR78Q5VTH9 848 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 ARHGAP45Q92619 1136 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 FEZ1Q99689 392 aa23.03■■□□□ 1.28
TNRC18-204ENST00000413081 LBHD1Q9BQE6 289 aaPredicted RBP23.03■■□□□ 1.28
TNRC18-204ENST00000413081 SAP30BPQ9UHR5 308 aaKnown RBP23.03■■□□□ 1.28
TNRC18-204ENST00000413081 HNRNPUQ00839 825 aaKnown RBP eCLIP23.02■■□□□ 1.28
TNRC18-204ENST00000413081 MFSD14CQ5VZR4 134 aa23.02■■□□□ 1.28
TNRC18-204ENST00000413081 EMILIN3Q9NT22 766 aa23.02■■□□□ 1.28
TNRC18-204ENST00000413081 RARSP54136 660 aaKnown RBP23.01■■□□□ 1.27
TNRC18-204ENST00000413081 ZYXQ15942 572 aaKnown RBP23.01■■□□□ 1.27
TNRC18-204ENST00000413081 ADGRA1Q86SQ6 560 aa23.01■■□□□ 1.27
TNRC18-204ENST00000413081 EDC3Q96F86 508 aaKnown RBP23.01■■□□□ 1.27
TNRC18-204ENST00000413081 SENP6Q9GZR1 1112 aaPredicted RBP23.01■■□□□ 1.27
TNRC18-204ENST00000413081 RABGAP1Q9Y3P9 1069 aa23.01■■□□□ 1.27
TNRC18-204ENST00000413081 PNMA6EA0A0J9YXQ4 647 aa23■■□□□ 1.27
TNRC18-204ENST00000413081 GH2P01242 217 aa23■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L15C9J2P7 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L13C9JLJ4 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L11C9JVI0 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L18D6R9N7 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L22D6RA61 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L17D6RBQ6 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L19D6RCP7 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L20D6RJB6 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 CNGA1P29973 690 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 USP17L24Q0WX57 530 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 OS9Q13438 667 aaPredicted RBP22.99■■□□□ 1.27
TNRC18-204ENST00000413081 YTHDC1Q96MU7 727 aaKnown RBP22.99■■□□□ 1.27
TNRC18-204ENST00000413081 PRKAG2Q9UGJ0 569 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 NDUFB9Q9Y6M9 179 aa22.99■■□□□ 1.27
TNRC18-204ENST00000413081 IVNS1ABPQ9Y6Y0 642 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms