RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CC2D1AQ6P1N0 951 aaPredicted RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 SLC30A9Q6PML9 568 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CHST3Q7LGC8 479 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 OTUD7AQ8TE49 926 aaPredicted RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CACTINQ8WUQ7 758 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 SEC62Q99442 399 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PLEKHA4Q9H4M7 779 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 JADE2Q9NQC1 790 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 BLMP54132 1417 aaPredicted RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC160A6NGH7 325 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 BMP15O95972 392 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 APBA3O96018 575 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CALM1P0DP23 149 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CALM2P0DP24 149 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CALM3P0DP25 149 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 ZBTB17Q13105 803 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CPLX3Q8WVH0 158 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 KIF2CQ99661 725 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 BIN1O00499 593 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CETN3O15182 167 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 SWT1Q5T5J6 900 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 TRMT1LQ7Z2T5 733 aaKnown RBP9.51□□□□□ -0.89
PBRM1-209ENST00000412587 HEATR3Q7Z4Q2 680 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC24Q8N4L8 307 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 CCDC113Q9H0I3 377 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 LZTFL1Q9NQ48 299 aa9.51□□□□□ -0.89
PBRM1-209ENST00000412587 ATP7BP35670 1465 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 USP6P35125 1406 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 SCP2P22307 547 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 PSEN1P49768 467 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 PPP1R7Q15435 360 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 NAPGQ99747 312 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-209ENST00000412587 ABCC3O15438 1527 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 NEURL1BA8MQ27 555 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 HNRNPH1P31943 449 aaKnown RBP9.5□□□□□ -0.89
PBRM1-209ENST00000412587 CCHCR1Q8TD31 782 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 STAG1Q8WVM7 1258 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 LPIN2Q92539 896 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 CLEC11AQ9Y240 323 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 CAND2O75155 1236 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 AK2P54819 239 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 MAP3K9P80192 1104 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 PKP1Q13835 747 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 C6orf163Q5TEZ5 329 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 KANK3Q6NY19 840 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 FAM43BQ6ZT52 329 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-209ENST00000412587 PPP1R13BQ96KQ4 1090 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 PARD6BQ9BYG5 372 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 SAMM50Q9Y512 469 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 NAPAP54920 295 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 ALS2CR12Q96Q35 445 aa9.5□□□□□ -0.89
PBRM1-209ENST00000412587 NUP88Q99567 741 aaPredicted RBP9.5□□□□□ -0.89
PBRM1-209ENST00000412587 E7EVH7 732 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 HIP1RO75146 1068 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 TAF5LO75529 589 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 APPBP2Q92624 585 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 SPAG5Q96R06 1193 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 TRIM7Q9C029 511 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 IQCGQ9H095 443 aaKnown RBP9.49□□□□□ -0.89
PBRM1-209ENST00000412587 NRBP1Q9UHY1 535 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 IGSF1Q8N6C5 1336 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 KCNG4Q8TDN1 519 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.49□□□□□ -0.89
PBRM1-209ENST00000412587 H0YIN7 160 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 DNAJC8O75937 253 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-209ENST00000412587 LMOD1P29536 600 aaPredicted RBP9.49□□□□□ -0.89
PBRM1-209ENST00000412587 ARHGAP31Q2M1Z3 1444 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 TDRD7Q8NHU6 1098 aaKnown RBP9.49□□□□□ -0.89
PBRM1-209ENST00000412587 PLA2R1Q13018 1463 aa9.49□□□□□ -0.89
PBRM1-209ENST00000412587 CALML3P27482 149 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 BAG6P46379 1132 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 TTLL7Q6ZT98 887 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 PACS2Q86VP3 889 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 RNF10Q8N5U6 811 aaKnown RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 USP44Q9H0E7 712 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 AOX1Q06278 1338 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 ZNF335Q9H4Z2 1342 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 ENO4A6NNW6 628 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 SYKP43405 635 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 POLE2P56282 527 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 SEPT7Q16181 437 aaKnown RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 TRIM68Q6AZZ1 485 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 KBTBD3Q8NAB2 608 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 TRIM58Q8NG06 486 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 ERMNQ8TAM6 284 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 STIM2Q9P246 746 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 MAP7D1Q3KQU3 841 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 RASIP1Q5U651 963 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 TCP11Q8WWU5 503 aa9.48□□□□□ -0.89
PBRM1-209ENST00000412587 MPHOSPH6Q99547 160 aaKnown RBP9.48□□□□□ -0.89
PBRM1-209ENST00000412587 KLC4Q9NSK0 619 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms