RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ERICH6Q7L0X2 663 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 VSIG10LQ86VR7 867 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 POM121Q96HA1 1249 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 KCNF1Q9H3M0 494 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 SEC31BQ9NQW1 1179 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 ATG3Q9NT62 314 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 LEMD3Q9Y2U8 911 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 MYOM1P52179 1685 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 RREB1Q92766 1687 aa7.25□□□□□ -1.25
LINC00342-201ENST00000412393 FAM208AQ9UK61 1670 aaKnown RBP7.25□□□□□ -1.25
LINC00342-201ENST00000412393 CCDC7Q96M83 1385 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 WDR64B1ANS9 1081 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 FOSL1P15407 271 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 ITGB5P18084 799 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 EZH2Q15910 746 aaKnown RBP7.24□□□□□ -1.25
LINC00342-201ENST00000412393 CEP135Q66GS9 1140 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 COG3Q96JB2 828 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 METTL22Q9BUU2 404 aaPredicted RBP7.24□□□□□ -1.25
LINC00342-201ENST00000412393 OVOS2A0A0G2JMS6 1433 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 NUP188Q5SRE5 1749 aa7.24□□□□□ -1.25
LINC00342-201ENST00000412393 PTPRAP18433 802 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 FLIIQ13045 1269 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 MSMPQ1L6U9 139 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 CRTC2Q53ET0 693 aaPredicted RBP7.23□□□□□ -1.25
LINC00342-201ENST00000412393 ANKRD24Q8TF21 1146 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 CAMKK2Q96RR4 588 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 OSGEPQ9NPF4 335 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 NLRP2Q9NX02 1062 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 TFIP11Q9UBB9 837 aaKnown RBP7.23□□□□□ -1.25
LINC00342-201ENST00000412393 FNDC3AQ9Y2H6 1198 aaKnown RBP7.23□□□□□ -1.25
LINC00342-201ENST00000412393 RGPD3A6NKT7 1758 aaPredicted RBP7.23□□□□□ -1.25
LINC00342-201ENST00000412393 RGPD4Q7Z3J3 1758 aa7.23□□□□□ -1.25
LINC00342-201ENST00000412393 MAP2P11137 1827 aaKnown RBP7.22□□□□□ -1.25
LINC00342-201ENST00000412393 PARD3Q8TEW0 1356 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L15C9J2P7 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L10C9JJH3 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L13C9JLJ4 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L12C9JPN9 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L11C9JVI0 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L21D6R901 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L18D6R9N7 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L22D6RA61 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L17D6RBQ6 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L19D6RCP7 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L20D6RJB6 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 EXOC5O00471 708 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP17L24Q0WX57 530 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 FDX2Q6P4F2 183 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 MARCH10Q8NA82 808 aaPredicted RBP7.22□□□□□ -1.25
LINC00342-201ENST00000412393 AGBL5Q8NDL9 886 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
LINC00342-201ENST00000412393 IP6K1Q92551 441 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 KRTAP4-2Q9BYR5 136 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 LACRTQ9GZZ8 138 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 ADAM19Q9H013 955 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 CCDC39Q9UFE4 941 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 LRFN2Q9ULH4 789 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 USP20Q9Y2K6 914 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 MAP3K19Q56UN5 1328 aa7.22□□□□□ -1.25
LINC00342-201ENST00000412393 TNS2Q63HR2 1409 aa7.21□□□□□ -1.25
LINC00342-201ENST00000412393 FYB1O15117 783 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 KIF4AO95239 1232 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 IL2RBP14784 551 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 FBLN1P23142 703 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 PREPP48147 710 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 AMPHP49418 695 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 CABP4P57796 275 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 R3HDM1Q15032 1099 aaKnown RBP7.21□□□□□ -1.26
LINC00342-201ENST00000412393 PIK3R5Q8WYR1 880 aa7.21□□□□□ -1.26
LINC00342-201ENST00000412393 LTV1Q96GA3 475 aaPredicted RBP7.21□□□□□ -1.26
LINC00342-201ENST00000412393 LRP5O75197 1615 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 BCL9O00512 1426 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 NHSQ6T4R5 1651 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 MEGF11A6BM72 1044 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 H3BRJ5 948 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 GAS2O43903 313 aaKnown RBP7.2□□□□□ -1.26
LINC00342-201ENST00000412393 BRD2P25440 801 aaKnown RBP7.2□□□□□ -1.26
LINC00342-201ENST00000412393 HOXA10P31260 410 aaPredicted RBP7.2□□□□□ -1.26
LINC00342-201ENST00000412393 HOXC9P31274 260 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 TTC39BQ5VTQ0 682 aaPredicted RBP7.2□□□□□ -1.26
LINC00342-201ENST00000412393 TXNDC11Q6PKC3 985 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 POLR3GLQ9BT43 218 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 OSBPL1AQ9BXW6 950 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 ANKRD26Q9UPS8 1709 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 BTAF1O14981 1849 aa7.2□□□□□ -1.26
LINC00342-201ENST00000412393 NSD3Q9BZ95 1437 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 ADAM11O75078 769 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 HSPA5P11021 654 aaKnown RBP7.19□□□□□ -1.26
LINC00342-201ENST00000412393 MAP4P27816 1152 aaKnown RBP7.19□□□□□ -1.26
LINC00342-201ENST00000412393 SCNN1AP37088 669 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 ATP11AP98196 1134 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 RRS1Q15050 365 aaKnown RBP7.19□□□□□ -1.26
LINC00342-201ENST00000412393 PTF1AQ7RTS3 328 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 TP53INP2Q8IXH6 220 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 MFSD14AQ96MC6 490 aa7.19□□□□□ -1.26
LINC00342-201ENST00000412393 BSDC1Q9NW68 430 aaPredicted RBP7.19□□□□□ -1.26
LINC00342-201ENST00000412393 RTL1A6NKG5 1358 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms