RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CRNKL1Q9BZJ0 848 aaKnown RBP14.05□□□□□ -0.16
LINC00963-201ENST00000412141 ARMT1Q9H993 441 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 TMOD4Q9NZQ9 345 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 ZBTB21Q9ULJ3 1066 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 MYPNQ86TC9 1320 aa14.05□□□□□ -0.16
LINC00963-201ENST00000412141 PEX10O60683 326 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 IGSF3O75054 1194 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 GNRH1P01148 92 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 CYP2D6P10635 497 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 BACE1P56817 501 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 RAB3GAP1Q15042 981 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 MTFR1Q15390 333 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 TSHZ3Q63HK5 1081 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 TTC6Q86TZ1 520 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 METTL16Q86W50 562 aaKnown RBP14.04□□□□□ -0.16
LINC00963-201ENST00000412141 CERS3Q8IU89 383 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 LCORLQ8N3X6 602 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 PROCA1Q8NCQ7 364 aaPredicted RBP14.04□□□□□ -0.16
LINC00963-201ENST00000412141 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.04□□□□□ -0.16
LINC00963-201ENST00000412141 ASCC2Q9H1I8 757 aaPredicted RBP14.04□□□□□ -0.16
LINC00963-201ENST00000412141 MCM9Q9NXL9 1143 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 SERPINB13Q9UIV8 391 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 PNMA3Q9UL41 463 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 SLC45A1Q9Y2W3 748 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 PHIPQ8WWQ0 1821 aa14.04□□□□□ -0.16
LINC00963-201ENST00000412141 TCRBV5S4A2TA0A5A2 114 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 USP17L10C9JJH3 530 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
LINC00963-201ENST00000412141 PRKAB2O43741 272 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 MBD4O95243 580 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 GRK4P32298 578 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 PRMT2P55345 433 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 PABPC4Q13310 644 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC00963-201ENST00000412141 CERKLQ49MI3 558 aaPredicted RBP14.03□□□□□ -0.16
LINC00963-201ENST00000412141 FEZ1Q99689 392 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 HAUS7Q99871 368 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 WDR18Q9BV38 432 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 SIPA1L1O43166 1804 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 CDK5RAP2Q96SN8 1893 aa14.03□□□□□ -0.16
LINC00963-201ENST00000412141 MPHOSPH10O00566 681 aaKnown RBP14.02□□□□□ -0.17
LINC00963-201ENST00000412141 ADD2P35612 726 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 FLT3LGP49771 235 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 IRX3P78415 501 aaPredicted RBP14.02□□□□□ -0.17
LINC00963-201ENST00000412141 ABCB5Q2M3G0 1257 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 SH3D19Q5HYK7 790 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 P2RX7Q99572 595 aaKnown RBP14.02□□□□□ -0.17
LINC00963-201ENST00000412141 TBC1D2Q9BYX2 928 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 PCDHB15Q9Y5E8 787 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 PTPRFP10586 1907 aa14.02□□□□□ -0.17
LINC00963-201ENST00000412141 CYP2D7A0A087X1C5 515 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 ELNP15502 786 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 RRP1P56182 461 aaKnown RBP14.01□□□□□ -0.17
LINC00963-201ENST00000412141 TATDN1Q6P1N9 297 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 ACER1Q8TDN7 264 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 DYNLL2Q96FJ2 89 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00963-201ENST00000412141 DCTPP1Q9H773 170 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 CABP5Q9NP86 173 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 DCP1AQ9NPI6 582 aaPredicted RBP14.01□□□□□ -0.17
LINC00963-201ENST00000412141 ECHDC1Q9NTX5 307 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 MYH1P12882 1939 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 ATAD5Q96QE3 1844 aa14.01□□□□□ -0.17
LINC00963-201ENST00000412141 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
LINC00963-201ENST00000412141 C19orf81C9J6K1 198 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 SMIM22K7EJ46 135 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 ADCY3O60266 1144 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 SHMT1P34896 483 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 TMED8Q6PL24 325 aaPredicted RBP14□□□□□ -0.17
LINC00963-201ENST00000412141 COA7Q96BR5 231 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 CRBNQ96SW2 442 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 PAGR1Q9BTK6 254 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 EHD4Q9H223 541 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 EMILIN3Q9NT22 766 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 CEP290O15078 2479 aa14□□□□□ -0.17
LINC00963-201ENST00000412141 FOCADQ5VW36 1801 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 CCL5P13501 91 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 GCLCP48506 637 aaPredicted RBP13.99□□□□□ -0.17
LINC00963-201ENST00000412141 SEPT2Q15019 361 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 FAM110CQ1W6H9 321 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 USP17L2Q6R6M4 530 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 RNF208Q9H0X6 261 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 GINM1Q9NU53 330 aa13.99□□□□□ -0.17
LINC00963-201ENST00000412141 HERVK_113P62684 666 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 UBXN2AP68543 259 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 STK11IPQ8N1F8 1099 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 OTUD7AQ8TE49 926 aaPredicted RBP13.98□□□□□ -0.17
LINC00963-201ENST00000412141 GPATCH3Q96I76 525 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 PUS7LQ9H0K6 701 aaKnown RBP13.98□□□□□ -0.17
LINC00963-201ENST00000412141 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 PCDH10Q9P2E7 1040 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 SLC4A4Q9Y6R1 1079 aa13.98□□□□□ -0.17
LINC00963-201ENST00000412141 USP17L12C9JPN9 530 aa13.97□□□□□ -0.17
LINC00963-201ENST00000412141 USP17L21D6R901 530 aa13.97□□□□□ -0.17
LINC00963-201ENST00000412141 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
LINC00963-201ENST00000412141 GABPAQ06546 454 aa13.97□□□□□ -0.17
LINC00963-201ENST00000412141 UBE3CQ15386 1083 aa13.97□□□□□ -0.17
LINC00963-201ENST00000412141 ZSCAN25Q6NSZ9 544 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms