RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 ZBTB47Q9UFB7 747 aaPredicted RBP7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 PRKAG2Q9UGJ0 569 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 FBXO3Q9UK99 471 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 LAMA3Q16787 3333 aa7.47□□□□□ -1.21
HMGN1P20-201ENST00000411849 USP17L5A8MUK1 530 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 MAP4K4O95819 1239 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 MAPK4P31152 587 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 RGS2P41220 211 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 CACNB2Q08289 660 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 SH3D19Q5HYK7 790 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCDC84Q86UT8 332 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 GPRC5AQ8NFJ5 357 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 MAFAQ8NHW3 353 aaPredicted RBP7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 CEP126Q9P2H0 1117 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 MROH7-TTC4A0A0A0MT08 1334 aa7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 PDS5AQ29RF7 1337 aaKnown RBP7.46□□□□□ -1.22
HMGN1P20-201ENST00000411849 ZNFX1Q9P2E3 1918 aaKnown RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 ZNF316A6NFI3 1004 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 CIAO1O76071 339 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 PYGBP11216 843 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 HOXA7P31268 230 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 CAP2P40123 477 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 BTDP43251 543 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 ATG9AQ7Z3C6 839 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 GTF3C2Q8WUA4 911 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 CDX2Q99626 313 aaPredicted RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 APBA2Q99767 749 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 USP44Q9H0E7 712 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 DDX4Q9NQI0 724 aaKnown RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 TMOD4Q9NZQ9 345 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 ABCF2Q9UG63 623 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 HERC5Q9UII4 1024 aaKnown RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 PTPRCP08575 1304 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 MYO5AQ9Y4I1 1855 aaKnown RBP7.45□□□□□ -1.22
HMGN1P20-201ENST00000411849 MYH8P13535 1937 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 GPR75-ASB3A0A0A6YYF3 556 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 FAM196BA6NMK8 535 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 C19orf81C9J6K1 198 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 MSCO60682 206 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 GLRX3O76003 335 aaKnown RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 LDHCP07864 332 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 ASNSP08243 561 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 SLURP2P0DP57 97 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCND3P30281 292 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 PHKA1P46020 1223 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 RFX5P48382 616 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 BACE1P56817 501 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 HERVK_113P62684 666 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 GSTO1P78417 241 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 MTMR2Q13614 643 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 USP6NLQ92738 828 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 WDR18Q9BV38 432 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 SENP6Q9GZR1 1112 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 SIL1Q9H173 461 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 CWC22Q9HCG8 908 aaKnown RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 PCDHB8Q9UN66 801 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 SALL2Q9Y467 1007 aaPredicted RBP7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 A0A0C4DFX4 3053 aa7.44□□□□□ -1.22
HMGN1P20-201ENST00000411849 PLXNA1Q9UIW2 1896 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 DNM1LO00429 736 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 FOSL2P15408 326 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 PLCG2P16885 1265 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 RHBDL3P58872 404 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 ERVK-9P63128 1117 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 ERVK-24P63145 666 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCNA1P78396 465 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 SMAD3P84022 425 aaKnown RBP7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 MECOMQ03112 1051 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCL14Q16627 93 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 MORN1Q5T089 497 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 MFSD14CQ5VZR4 134 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCDC102BQ68D86 513 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 GPR142Q7Z601 462 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 PDCD7Q8N8D1 485 aaKnown RBP7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 P2RX7Q99572 595 aaKnown RBP7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 TXNRD2Q9NNW7 524 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 HDAC5Q9UQL6 1122 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 UNC80Q8N2C7 3258 aa7.43□□□□□ -1.22
HMGN1P20-201ENST00000411849 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 USP17L10C9JJH3 530 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 CNGA1P29973 690 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 RTP1P59025 263 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 MAP2K5Q13163 448 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 MVPQ14764 893 aaKnown RBP7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 SHHQ15465 462 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 CCDC184Q52MB2 194 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 ARRDC4Q8NCT1 418 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 MYLIPQ8WY64 445 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 LPAR1Q92633 364 aa7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 EDC3Q96F86 508 aaKnown RBP7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 NOL10Q9BSC4 688 aaKnown RBP7.42□□□□□ -1.22
HMGN1P20-201ENST00000411849 PAGR1Q9BTK6 254 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms