RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 SH3RF3Q8TEJ3 882 aaPredicted RBP12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 TEKT1Q969V4 418 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZDHHC15Q96MV8 337 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 MTFR1LQ9H019 292 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 TOMM22Q9NS69 142 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 SERPINA10Q9UK55 444 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 DAGLAQ9Y4D2 1042 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 CDK5RAP2Q96SN8 1893 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 TNKSO95271 1327 aa12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 DDX60LQ5H9U9 1706 aaKnown RBP12.31□□□□□ -0.44
RN7SKP228-201ENST00000411042 PSME4Q14997 1843 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 NAV1Q8NEY1 1877 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 PSDA5PKW4 1024 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP17L3A6NCW0 530 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP17L4A6NCW7 530 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 POLD1P28340 1107 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 IARSP41252 1262 aaKnown RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZNF445P59923 1031 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 DIXDC1Q155Q3 683 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 GRIK5Q16478 980 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 RTN1Q16799 776 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 DACT2Q5SW24 774 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 IFIT1BQ5T764 474 aaKnown RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 L1TD1Q5T7N2 865 aaKnown RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 C16orf86Q6ZW13 317 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP17L1Q7RTZ2 530 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP48Q86UV5 1035 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 TRIM22Q8IYM9 498 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 ENAHQ8N8S7 591 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZNF396Q96N95 335 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 GPR101Q96P66 508 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 RNF26Q9BY78 433 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 NCOA5Q9HCD5 579 aaKnown RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 GPHNQ9NQX3 736 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 FAM217BQ9NTX9 383 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 NAP1L2Q9ULW6 460 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP228-201ENST00000411042 FSD2A1L4K1 749 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 RIMBP2O15034 1052 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 RANBP6O60518 1105 aaKnown RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 POLR3DP05423 398 aaPredicted RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 NOVP48745 357 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 SSRP1Q08945 709 aaKnown RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 RRP12Q5JTH9 1297 aaKnown RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 TGFBRAP1Q8WUH2 860 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 KIF12Q96FN5 646 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 DHX36Q9H2U1 1008 aaKnown RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 RCOR1Q9UKL0 485 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 TTF2Q9UNY4 1162 aaKnown RBP12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 FLT1P17948 1338 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 MYH1P12882 1939 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 PLIN4Q96Q06 1357 aa12.29□□□□□ -0.44
RN7SKP228-201ENST00000411042 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 TSPY2A6NKD2 308 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 MAP3K13O43283 966 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 ECE2O60344 883 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 DEXIO95424 95 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 KCNA3P22001 575 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 SMARCA1P28370 1054 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 CHRNA5P30532 468 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 KIF5BP33176 963 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 ADD1P35611 737 aaKnown RBP12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 GNAQP50148 359 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 TROAPQ12815 778 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 MICU3Q86XE3 530 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 ZNF444Q8N0Y2 327 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 CRACR2BQ8N4Y2 399 aaPredicted RBP12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 CERS5Q8N5B7 392 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 DDX11Q96FC9 970 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 IDI2Q9BXS1 227 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 EHD4Q9H223 541 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 MKNK2Q9HBH9 465 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
RN7SKP228-201ENST00000411042 USP17L8P0C7I0 530 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 XBP1P17861 261 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 CDC27P30260 824 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 DNM1Q05193 864 aaKnown RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 GABPAQ06546 454 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 TRIM29Q14134 588 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 FOXD4L5Q5VV16 416 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 APOBEC3HQ6NTF7 200 aaKnown RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 SLC51AQ86UW1 340 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 NEDD1Q8NHV4 660 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 NKX2-3Q8TAU0 364 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 GPT2Q8TD30 523 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 FOXD4L4Q8WXT5 416 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 LZTS2Q9BRK4 669 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 INCENPQ9NQS7 918 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 PIM2Q9P1W9 311 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 JAG2Q9Y219 1238 aa12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 ARIH1Q9Y4X5 557 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 MORC2Q9Y6X9 1032 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 ZNF646O15015 1829 aaPredicted RBP12.27□□□□□ -0.45
RN7SKP228-201ENST00000411042 PRPF3O43395 683 aaKnown RBP12.26□□□□□ -0.45
RN7SKP228-201ENST00000411042 WDHD1O75717 1129 aaPredicted RBP12.26□□□□□ -0.45
RN7SKP228-201ENST00000411042 YEATS4O95619 227 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms