RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 CYP2D6P10635 497 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 CDC27P30260 824 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
LIMS2-206ENST00000409754 EPS15P42566 896 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 PDE4BQ07343 736 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 STRIP1Q5VSL9 837 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
LIMS2-206ENST00000409754 RSBN1LQ6PCB5 846 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-206ENST00000409754 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 AMOTL1Q8IY63 956 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 ZSCAN10Q96SZ4 725 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-206ENST00000409754 RRAGCQ9HB90 399 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 FAM217BQ9NTX9 383 aaPredicted RBP16.43■□□□□ 0.22
LIMS2-206ENST00000409754 TNKSO95271 1327 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 ROBO3Q96MS0 1386 aa16.43■□□□□ 0.22
LIMS2-206ENST00000409754 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 G3V3G9 751 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 RANBP6O60518 1105 aaKnown RBP16.42■□□□□ 0.22
LIMS2-206ENST00000409754 USP17L8P0C7I0 530 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 UBE2HP62256 183 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 NTRK3Q16288 839 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 GPRC5DQ9NZD1 345 aa16.42■□□□□ 0.22
LIMS2-206ENST00000409754 GADD45BO75293 160 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 PRDM1O75626 825 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 RXRAP19793 462 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 DPY19L2Q6NUT2 758 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 TEX11Q8IYF3 940 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 TGFBRAP1Q8WUH2 860 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 C8orf76Q96K31 380 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 SCAND2PQ9GZW5 306 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 GPBP1L1Q9HC44 474 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 ELP1O95163 1332 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 STK36Q9NRP7 1315 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 CCDC196A0A1B0GTZ2 297 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 PPFIA3O75145 1194 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 RHBDL3P58872 404 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 EVX2Q03828 476 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 TNIP1Q15025 636 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 RTN1Q16799 776 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 L1TD1Q5T7N2 865 aaKnown RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 ZNF654Q8IZM8 581 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 ENAHQ8N8S7 591 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 NAV1Q8NEY1 1877 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 TRPM4Q8TD43 1214 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 FBXW7Q969H0 707 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
LIMS2-206ENST00000409754 DAGLAQ9Y4D2 1042 aa16.41■□□□□ 0.22
LIMS2-206ENST00000409754 IFNAR1P17181 557 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 FOSBP53539 338 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 HIRAP54198 1017 aaPredicted RBP16.4■□□□□ 0.22
LIMS2-206ENST00000409754 ZNF445P59923 1031 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 FKBP1AP62942 108 aaKnown RBP16.4■□□□□ 0.22
LIMS2-206ENST00000409754 ATL3Q6DD88 541 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 MAPKAPK5Q8IW41 473 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 MICALL2Q8IY33 904 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 CCDC144CPQ8IYA2 1237 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 FBXO18Q8NFZ0 1043 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
LIMS2-206ENST00000409754 ZSCAN23Q3MJ62 389 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 IFIT1BQ5T764 474 aaKnown RBP16.39■□□□□ 0.21
LIMS2-206ENST00000409754 FANCBQ8NB91 859 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 DPF2Q92785 391 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 SYAP1Q96A49 352 aaPredicted RBP16.39■□□□□ 0.21
LIMS2-206ENST00000409754 TMEM63CQ9P1W3 806 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 CFAP45Q9UL16 551 aa16.39■□□□□ 0.21
LIMS2-206ENST00000409754 ECM29Q5VYK3 1845 aa16.38■□□□□ 0.21
LIMS2-206ENST00000409754 FLT1P17948 1338 aa16.38■□□□□ 0.21
LIMS2-206ENST00000409754 DDX60LQ5H9U9 1706 aaKnown RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 FMNL1O95466 1100 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 POLR3DP05423 398 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 ZNF280AP59817 542 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 SSRP1Q08945 709 aaKnown RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
LIMS2-206ENST00000409754 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
LIMS2-206ENST00000409754 RBM27Q9P2N5 1060 aaKnown RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 CDK5RAP2Q96SN8 1893 aa16.38■□□□□ 0.21
LIMS2-206ENST00000409754 ASTN2O75129 1339 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-206ENST00000409754 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 DDAH1O94760 285 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 CALM1P0DP23 149 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 CALM2P0DP24 149 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 CALM3P0DP25 149 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 VEGFAP15692 232 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-206ENST00000409754 RPS12P25398 132 aaKnown RBP16.37■□□□□ 0.21
LIMS2-206ENST00000409754 GUCY1B3Q02153 619 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 HHIPL2Q6UWX4 724 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 SAMD7Q7Z3H4 446 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 KIAA0825Q8IV33 1275 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 WASF1Q92558 559 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 PHKBQ93100 1093 aa16.37■□□□□ 0.21
LIMS2-206ENST00000409754 SPATA32Q96LK8 384 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms