RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ADAT2Q7Z6V5 191 aaKnown RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 SDCCAG8Q86SQ7 713 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 KCNG4Q8TDN1 519 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 SMYD2Q9NRG4 433 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 SPTLC2O15270 562 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 ZSCAN22P10073 491 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 GSDMDP57764 484 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 LMBR1Q8WVP7 490 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 ZSCAN16Q9H4T2 348 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 IGHDP01880 384 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 UBE2HP62256 183 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 NSRP1Q9H0G5 558 aaKnown RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 EIF4G3O43432 1585 aaKnown RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 ESPNB1AK53 854 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 SARNPP82979 210 aaKnown RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 CEP85LQ5SZL2 805 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 RBM46Q8TBY0 533 aaKnown RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 IFT140Q96RY7 1462 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 HSPA4P34932 840 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 ASIC2Q16515 512 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 MYLK4Q86YV6 388 aaPredicted RBP9.36□□□□□ -0.91
SCN9A-203ENST00000409672 DBNDD1Q9H9R9 158 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 PCDHB13Q9Y5F0 798 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 PDE6BP35913 854 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 DDX12PQ92771 950 aa9.36□□□□□ -0.91
SCN9A-203ENST00000409672 LRRIQ4A6NIV6 560 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 ZNF131P52739 623 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SLC12A2P55011 1212 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CPLX4Q7Z7G2 160 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 BLZF1Q9H2G9 400 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 GOLGA8HP0CJ92 632 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 OSTNP61366 133 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 PUM3Q15397 648 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 GKAP1Q5VSY0 366 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 XAGE2Q96GT9 111 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 IFNKQ9P0W0 207 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CEP57Q86XR8 500 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 DISC1Q9NRI5 854 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 C19orf44Q9H6X5 657 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 RNMTO43148 476 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 PSMD2Q13200 908 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 POLA2Q14181 598 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CLUL1Q15846 466 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 TSR3Q9UJK0 312 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE15A4D2H0 777 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 ZBBXA8MT70 800 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE8P0CG41 777 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 RPL13P26373 211 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 RPS6KA2Q15349 733 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE6Q86UF2 777 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 CTAGE4Q8IX94 777 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 ANKS4BQ8N8V4 417 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SUPT20HQ8NEM7 779 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 WDR48Q8TAF3 677 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 MTUS1Q9ULD2 1270 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 EXOC3O60645 756 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 HP1BP3Q5SSJ5 553 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 LIN9Q5TKA1 542 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 SDR42E1Q8WUS8 393 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 MRPS27Q92552 414 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 RBM28Q9NW13 759 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 STIM2Q9P246 746 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 DNM3Q9UQ16 869 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 PTPN23Q9H3S7 1636 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 ACBD5Q5T8D3 534 aaPredicted RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 HINFPQ9BQA5 517 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 TBC1D2Q9BYX2 928 aa9.35□□□□□ -0.91
SCN9A-203ENST00000409672 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
SCN9A-203ENST00000409672 HERC4Q5GLZ8 1057 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-203ENST00000409672 C1orf228Q6PIY5 440 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 AP5M1Q9H0R1 490 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 DENND4BO75064 1496 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-203ENST00000409672 GAS7O60861 476 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 VPS41P49754 854 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 SNAP25P60880 206 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 ZSCAN23Q3MJ62 389 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 OTUD7BQ6GQQ9 843 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 AS3MTQ9HBK9 375 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 ATICP31939 592 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 POLGP54098 1239 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-203ENST00000409672 PRR16Q569H4 304 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 DNAJC5BQ9UF47 199 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 GSTA1P08263 222 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 GSTA2P09210 222 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 PDE1CQ14123 709 aaPredicted RBP9.34□□□□□ -0.91
SCN9A-203ENST00000409672 ANO4Q32M45 955 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 KCNJ14Q9UNX9 436 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 MNAT1P51948 309 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 CDC26Q8NHZ8 85 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 LIG4P49917 911 aa9.34□□□□□ -0.91
SCN9A-203ENST00000409672 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCN9A-203ENST00000409672 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms