RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 IGDCC4Q8TDY8 1250 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 DPF2Q92785 391 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 TMEM87BQ96K49 555 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 SH2B1Q9NRF2 756 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 CNTNAP1P78357 1384 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 SHROOM1Q2M3G4 852 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 FOXD4L5Q5VV16 416 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 NUP133Q8WUM0 1156 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 FOXD4L4Q8WXT5 416 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 ALDH8A1Q9H2A2 487 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-204ENST00000409530 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
SHANK2-204ENST00000409530 LMOD1P29536 600 aaPredicted RBP18.37■□□□□ 0.53
SHANK2-204ENST00000409530 PDIA3P30101 505 aaKnown RBP18.37■□□□□ 0.53
SHANK2-204ENST00000409530 FOSBP53539 338 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 IFIT1BQ5T764 474 aaKnown RBP18.37■□□□□ 0.53
SHANK2-204ENST00000409530 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 AGXT2Q9BYV1 514 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 FGRP09769 529 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 PCP11498 1178 aaKnown RBP18.37■□□□□ 0.53
SHANK2-204ENST00000409530 CUL4AQ13619 759 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 DDX11Q96FC9 970 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 SLC12A7Q9Y666 1083 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 WDR19Q8NEZ3 1342 aa18.37■□□□□ 0.53
SHANK2-204ENST00000409530 GRIN3BO60391 1043 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 JAK2O60674 1132 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 GDF11O95390 407 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 AKR1B1P15121 316 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 ANGEL2Q5VTE6 544 aaKnown RBP18.36■□□□□ 0.53
SHANK2-204ENST00000409530 APOA5Q6Q788 366 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 MIGA2Q7L4E1 593 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 MTMR14Q8NCE2 650 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 ZBED3Q96IU2 234 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-204ENST00000409530 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 SMC3Q9UQE7 1217 aa18.36■□□□□ 0.53
SHANK2-204ENST00000409530 ENTPD3O75355 529 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 SHMT1P34896 483 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 PKP1Q13835 747 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 DHX36Q9H2U1 1008 aaKnown RBP18.35■□□□□ 0.53
SHANK2-204ENST00000409530 GGA3Q9NZ52 723 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 GOLGA8AA7E2F4 631 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 METAP2P50579 478 aaKnown RBP eCLIP18.35■□□□□ 0.53
SHANK2-204ENST00000409530 RASA3Q14644 834 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 PRAMEF18Q5VWM3 479 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 IL17RBQ9NRM6 502 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
SHANK2-204ENST00000409530 ZBTB43O43298 467 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 GJB2P29033 226 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 ATP2B2Q01814 1243 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 GABPAQ06546 454 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 HPS5Q9UPZ3 1129 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.34■□□□□ 0.53
SHANK2-204ENST00000409530 PFKFB2O60825 505 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 SEC23AQ15436 765 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 SYNE3Q6ZMZ3 975 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 RASGRP2Q7LDG7 609 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 ZNF654Q8IZM8 581 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 CMTR1Q8N1G2 835 aaKnown RBP18.34■□□□□ 0.53
SHANK2-204ENST00000409530 FAM151AQ8WW52 585 aa18.34■□□□□ 0.53
SHANK2-204ENST00000409530 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
SHANK2-204ENST00000409530 CCDC82Q8N4S0 544 aa18.33■□□□□ 0.52
SHANK2-204ENST00000409530 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.33■□□□□ 0.524e-7■■■□□ 19
SHANK2-204ENST00000409530 ATRNL1Q5VV63 1379 aa18.33■□□□□ 0.52
SHANK2-204ENST00000409530 CPLX1O14810 134 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 RAD21O60216 631 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 TNNI2P48788 182 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-204ENST00000409530 ZNF274Q96GC6 653 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-204ENST00000409530 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-204ENST00000409530 SWAP70Q9UH65 585 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 LIFRP42702 1097 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 IL27Q8NEV9 243 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
SHANK2-204ENST00000409530 FZD1Q9UP38 647 aa18.32■□□□□ 0.52
SHANK2-204ENST00000409530 PTPDC1A2A3K4 754 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 CDC27P30260 824 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 ADD1P35611 737 aaKnown RBP18.31■□□□□ 0.52
SHANK2-204ENST00000409530 CERKLQ49MI3 558 aaPredicted RBP18.31■□□□□ 0.52
SHANK2-204ENST00000409530 DLK2Q6UY11 383 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 SGMS1Q86VZ5 419 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 INTS4Q96HW7 963 aaKnown RBP18.31■□□□□ 0.52
SHANK2-204ENST00000409530 EHD4Q9H223 541 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 KAT14Q9H8E8 782 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 TNFAIP1Q13829 316 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 RCSD1Q6JBY9 416 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 LRRC47Q8N1G4 583 aaKnown RBP18.31■□□□□ 0.52
SHANK2-204ENST00000409530 FBXL16Q8N461 479 aa18.31■□□□□ 0.52
SHANK2-204ENST00000409530 POLR2AP24928 1970 aaKnown RBP18.3■□□□□ 0.52
SHANK2-204ENST00000409530 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
SHANK2-204ENST00000409530 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
SHANK2-204ENST00000409530 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
SHANK2-204ENST00000409530 EAPPQ56P03 285 aaPredicted RBP18.3■□□□□ 0.52
SHANK2-204ENST00000409530 PHKBQ93100 1093 aa18.3■□□□□ 0.52
SHANK2-204ENST00000409530 DEFB129Q9H1M3 183 aa18.3■□□□□ 0.52
SHANK2-204ENST00000409530 CHMP5Q9NZZ3 219 aa18.3■□□□□ 0.52
SHANK2-204ENST00000409530 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
SHANK2-204ENST00000409530 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms