RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 BCRP11274 1271 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 KRT5P13647 590 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 GCKP35557 465 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 CCDC105Q8IYK2 499 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 GBP7Q8N8V2 638 aaPredicted RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 VCX3AQ9NNX9 186 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 DUOX2Q9NRD8 1548 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 NPATQ14207 1427 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 IBTKQ9P2D0 1353 aaPredicted RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 KRT15P19012 456 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 STX2P32856 288 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 SETDB2Q96T68 719 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 TRIM31Q9BZY9 425 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 IQSEC3Q9UPP2 1182 aaPredicted RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 GPATCH8Q9UKJ3 1502 aaKnown RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 RFC1P35251 1148 aaPredicted RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 MIGA1Q8NAN2 632 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 RNASE9P60153 205 aaKnown RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 SEPT14Q6ZU15 432 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
RNF43-201ENST00000407977 RABGAP1Q9Y3P9 1069 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 TACC3Q9Y6A5 838 aa14.38□□□□□ -0.11
RNF43-201ENST00000407977 RFC4P35249 363 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 IRS4O14654 1257 aaPredicted RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 MUM1Q2TAK8 710 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 PPANQ9NQ55 473 aaKnown RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 BEND3Q5T5X7 828 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 MYSM1Q5VVJ2 828 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 FBXO31Q5XUX0 539 aaPredicted RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 NCOA5Q9HCD5 579 aaKnown RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 MYO1AQ9UBC5 1043 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 DKC1O60832 514 aaKnown RBP eCLIP14.37□□□□□ -0.113e-13■□□□□ 8.8
RNF43-201ENST00000407977 LDHBP07195 334 aaKnown RBP14.37□□□□□ -0.11
RNF43-201ENST00000407977 DNM2P50570 870 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 SLC39A6Q13433 755 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 NONOQ15233 471 aaKnown RBP eCLIP14.37□□□□□ -0.11
RNF43-201ENST00000407977 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 AMFRQ9UKV5 643 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 BIRC3Q13489 604 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 EFCAB13Q8IY85 973 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 KIFC2Q96AC6 838 aa14.37□□□□□ -0.11
RNF43-201ENST00000407977 COL17A1Q9UMD9 1497 aaPredicted RBP14.36□□□□□ -0.11
RNF43-201ENST00000407977 LRWD1Q9UFC0 647 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 ATP2A3Q93084 1043 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 TBC1D31Q96DN5 1066 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 DCAF5Q96JK2 942 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 Q9H521 79 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 RABEP2Q9H5N1 569 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 UGGT2Q9NYU1 1516 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 RIMS2Q9UQ26 1411 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 PLCH2O75038 1416 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 FBLN1P23142 703 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 CMA1P23946 247 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 SRGAP1Q7Z6B7 1085 aa14.36□□□□□ -0.11
RNF43-201ENST00000407977 GPAA1O43292 621 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 SNCBQ16143 134 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 AP1ARQ63HQ0 302 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
RNF43-201ENST00000407977 NIP7Q9Y221 180 aaKnown RBP eCLIP14.35□□□□□ -0.11
RNF43-201ENST00000407977 RIPOR2Q9Y4F9 1068 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 CRCPO75575 148 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 SLC8A3P57103 927 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 SH2D4AQ9H788 454 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 HMGB1P1B2RPK0 211 aaPredicted RBP14.35□□□□□ -0.11
RNF43-201ENST00000407977 PICALMQ13492 652 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
RNF43-201ENST00000407977 PPP1R21Q6ZMI0 780 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
RNF43-201ENST00000407977 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
RNF43-201ENST00000407977 CCDC169A6NNP5 214 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 CHL1O00533 1208 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 CCNT1O60563 726 aaKnown RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 ADKP55263 362 aaKnown RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 GRK7Q8WTQ7 553 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 DENND4BO75064 1496 aaPredicted RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 H7C1D1 291 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 EVI5O60447 810 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 TRIM37O94972 964 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 PFKFB1P16118 471 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 TTLL12Q14166 644 aaPredicted RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 GEN1Q17RS7 908 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 KRT24Q2M2I5 525 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 CADPS2Q86UW7 1296 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 OGFOD1Q8N543 542 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 TDRD7Q8NHU6 1098 aaKnown RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 METTL22Q9BUU2 404 aaPredicted RBP14.34□□□□□ -0.11
RNF43-201ENST00000407977 CDC23Q9UJX2 597 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 TXNDC9O14530 226 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 LONRF2Q1L5Z9 754 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 RRAGAQ7L523 313 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 EPSTI1Q96J88 318 aa14.34□□□□□ -0.11
RNF43-201ENST00000407977 PTPRKQ15262 1439 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms