RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 FAM109BQ6ICB4 259 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SH3RF3Q8TEJ3 882 aaPredicted RBP14.77□□□□□ -0.05
SPTLC1P3-201ENST00000403408 CHD9Q3L8U1 2897 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 LTBP2Q14767 1821 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 BACE1P56817 501 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ERICH6Q7L0X2 663 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 GPR142Q7Z601 462 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 FAM9BQ8IZU0 186 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 GPRC5AQ8NFJ5 357 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 NUDT12Q9BQG2 462 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 BDP1A6H8Y1 2624 aa14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MYO5AQ9Y4I1 1855 aaKnown RBP14.76□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ZKSCAN1P17029 563 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 PABPC4Q13310 644 aaKnown RBP eCLIP14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SPTY2D1Q68D10 685 aaPredicted RBP14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 METTL16Q86W50 562 aaKnown RBP14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SLF2Q8IX21 1173 aa14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MEIS3Q99687 375 aa14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 EMILIN3Q9NT22 766 aa14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 NDUFB9Q9Y6M9 179 aa14.75□□□□□ -0.05
SPTLC1P3-201ENST00000403408 GDF11O95390 407 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 IGHA2P01877 340 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ERVK-9P63128 1117 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ERVK-24P63145 666 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 IRX3P78415 501 aaPredicted RBP14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ADGRA1Q86SQ6 560 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TEX11Q8IYF3 940 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TRPV1Q8NER1 839 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SOCS4Q8WXH5 440 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TBC1D2Q9BYX2 928 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 RLFQ13129 1914 aa14.74□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MCAMP43121 646 aa14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SPATA5Q8NB90 893 aa14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 CDCA7LQ96GN5 454 aa14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 PAGR1Q9BTK6 254 aa14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SENP6Q9GZR1 1112 aaPredicted RBP14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 HERC5Q9UII4 1024 aaKnown RBP14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 FOCADQ5VW36 1801 aa14.73□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MAPK4P31152 587 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ATN1P54259 1190 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SLFN5Q08AF3 891 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 C9orf50Q5SZB4 431 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 PLEKHH3Q7Z736 793 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MAPKAPK5Q8IW41 473 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 CDX2Q99626 313 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TTYH1Q9H313 450 aaPredicted RBP14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 PI4KBQ9UBF8 816 aa14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 NOB1Q9ULX3 412 aaKnown RBP14.72□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MAP4K4O95819 1239 aaPredicted RBP14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ARID4AP29374 1257 aaPredicted RBP14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 RGS2P41220 211 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SHHQ15465 462 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 NPLOC4Q8TAT6 608 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 APBA2Q99767 749 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 SEMA6BQ9H3T3 888 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 AS3MTQ9HBK9 375 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 AATFQ9NY61 560 aaKnown RBP eCLIP14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 TMOD4Q9NZQ9 345 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 RAI14Q9P0K7 980 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 ZBTB21Q9ULJ3 1066 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 REV3LO60673 3130 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 MYO9BQ13459 2157 aa14.71□□□□□ -0.05
SPTLC1P3-201ENST00000403408 CHD7Q9P2D1 2997 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 USP17L10C9JJH3 530 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 LDHCP07864 332 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ASNSP08243 561 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MAP2K5Q13163 448 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MVPQ14764 893 aaKnown RBP14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ALDH1L2Q3SY69 923 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TRMT44Q8IYL2 757 aaKnown RBP14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TGFBRAP1Q8WUH2 860 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 NEUROD6Q96NK8 337 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SMC4Q9NTJ3 1288 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PALD1Q9ULE6 856 aa14.7□□□□□ -0.06
SPTLC1P3-201ENST00000403408 FLT1P17948 1338 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 C19orf81C9J6K1 198 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 RTP1P59025 263 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 GSTO1P78417 241 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SNRKQ9NRH2 765 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 BTBD7Q9P203 1132 aa14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 DDX20Q9UHI6 824 aaKnown RBP14.69□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SMCHD1A6NHR9 2005 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 E9PSI1 815 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SRGAP3O43295 1099 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 CYP2C19P33261 490 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PPP4CP60510 307 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MTX1Q13505 466 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SH3RF1Q7Z6J0 888 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 TRMT2AQ8IZ69 625 aaKnown RBP14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 MYLIPQ8WY64 445 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 EDC3Q96F86 508 aaKnown RBP14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 SAP30BPQ9UHR5 308 aaKnown RBP14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 AKAP2Q9Y2D5 859 aa14.68□□□□□ -0.06
SPTLC1P3-201ENST00000403408 GH2P01242 217 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 PTPREP23469 700 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ITGB8P26012 769 aa14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 DYNLL1P63167 89 aaKnown RBP14.67□□□□□ -0.06
SPTLC1P3-201ENST00000403408 ZYXQ15942 572 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms