RNA–Protein interactions for RNA: ENST00000399091.1

AC007952.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC007952.2, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007952.2-201ENST00000399091 ERVK-9P63128 1117 aa17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 ERVK-24P63145 666 aa17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 PDE3AQ14432 1141 aa17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 ZNF697Q5TEC3 545 aa17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 LBHD1Q9BQE6 289 aaPredicted RBP17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 SENP6Q9GZR1 1112 aaPredicted RBP17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 SIPA1L1O43166 1804 aa17.04■□□□□ 0.32
AC007952.2-201ENST00000399091 TTC28Q96AY4 2481 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 ASNSP08243 561 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 PLEKHH3Q7Z736 793 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 APBA2Q99767 749 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 TMOD4Q9NZQ9 345 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
AC007952.2-201ENST00000399091 IGHA2P01877 340 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 MAP2K5Q13163 448 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 GTF3C2Q8WUA4 911 aaPredicted RBP17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 XAGE2Q96GT9 111 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 GINM1Q9NU53 330 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 FLRT1Q9NZU1 646 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 HMG20BQ9P0W2 317 aa17.02■□□□□ 0.32
AC007952.2-201ENST00000399091 LTBP2Q14767 1821 aa17.02■□□□□ 0.31
AC007952.2-201ENST00000399091 A0A1B0GUL7 405 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 USP17L10C9JJH3 530 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 UBTFL1P0CB47 393 aaPredicted RBP17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 GSTO1P78417 241 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 SHHQ15465 462 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 MAFAQ8NHW3 353 aaPredicted RBP17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 LPAR1Q92633 364 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 EDC3Q96F86 508 aaKnown RBP17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 DHX36Q9H2U1 1008 aaKnown RBP17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 DNAJC18Q9H819 358 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 EMILIN3Q9NT22 766 aa17.01■□□□□ 0.31
AC007952.2-201ENST00000399091 CDH23Q9H251 3354 aa17■□□□□ 0.31
AC007952.2-201ENST00000399091 RLFQ13129 1914 aa17■□□□□ 0.31
AC007952.2-201ENST00000399091 CNMDO75829 334 aa17■□□□□ 0.31
AC007952.2-201ENST00000399091 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
AC007952.2-201ENST00000399091 TBC1D9Q6ZT07 1266 aa17■□□□□ 0.31
AC007952.2-201ENST00000399091 FOXP4Q8IVH2 680 aaPredicted RBP17■□□□□ 0.31
AC007952.2-201ENST00000399091 TEX11Q8IYF3 940 aa17■□□□□ 0.31
AC007952.2-201ENST00000399091 TTYH1Q9H313 450 aaPredicted RBP17■□□□□ 0.31
AC007952.2-201ENST00000399091 DDX20Q9UHI6 824 aaKnown RBP17■□□□□ 0.31
AC007952.2-201ENST00000399091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17■□□□□ 0.31
AC007952.2-201ENST00000399091 DNM1LO00429 736 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 MSCO60682 206 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 HOXC6P09630 235 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 RTP1P59025 263 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 C9orf50Q5SZB4 431 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 SH3RF3Q8TEJ3 882 aaPredicted RBP16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 AKAP2Q9Y2D5 859 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 RABGAP1Q9Y3P9 1069 aa16.99■□□□□ 0.31
AC007952.2-201ENST00000399091 MUC3AQ02505 3323 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 ATN1P54259 1190 aaPredicted RBP16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 PPP4CP60510 307 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 SMAD3P84022 425 aaKnown RBP16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 TFCP2Q12800 502 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 MFSD14CQ5VZR4 134 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 PI16Q6UXB8 463 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 CCAR1Q8IX12 1150 aaKnown RBP16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
AC007952.2-201ENST00000399091 SLC15A5A6NIM6 579 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 PTPREP23469 700 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 ARID4AP29374 1257 aaPredicted RBP16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 ALDH1L2Q3SY69 923 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 USP17L2Q6R6M4 530 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 TRPV1Q8NER1 839 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 SYMPKQ92797 1274 aaKnown RBP16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 C12orf42Q96LP6 360 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 PRKAG2Q9UGJ0 569 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 ZBTB21Q9ULJ3 1066 aa16.97■□□□□ 0.31
AC007952.2-201ENST00000399091 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 LBX2Q6XYB7 198 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 SLC39A5Q6ZMH5 540 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 NPLOC4Q8TAT6 608 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 RAI14Q9P0K7 980 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 HDAC5Q9UQL6 1122 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
AC007952.2-201ENST00000399091 GDF11O95390 407 aa16.95■□□□□ 0.3
AC007952.2-201ENST00000399091 CCNA1P78396 465 aa16.95■□□□□ 0.3
AC007952.2-201ENST00000399091 SNX17Q15036 470 aa16.95■□□□□ 0.3
AC007952.2-201ENST00000399091 FOCADQ5VW36 1801 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L15C9J2P7 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L13C9JLJ4 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L11C9JVI0 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L18D6R9N7 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L22D6RA61 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L17D6RBQ6 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L19D6RCP7 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L20D6RJB6 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 CYBAP13498 195 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 CYP2C19P33261 490 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 MCAMP43121 646 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 ATP2B2Q01814 1243 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 USP17L24Q0WX57 530 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 GRB14Q14449 540 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 CATSPERGQ6ZRH7 1159 aa16.94■□□□□ 0.3
AC007952.2-201ENST00000399091 TGFBRAP1Q8WUH2 860 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 470.5 ms