RNA–Protein interactions for RNA: ENST00000399027.3

CYCSP55-201, Transcript of cytochrome c, somatic pseudogene 55, humanhuman

BASIC

Gene CYCSP55, Length 311 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP55-201ENST00000399027 NAPBQ9H115 298 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 GINM1Q9NU53 330 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 MYH4Q9Y623 1939 aa12.48□□□□□ -0.41
CYCSP55-201ENST00000399027 SMIM22K7EJ46 135 aa12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 SGSM2O43147 1006 aa12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 REM2Q8IYK8 340 aaPredicted RBP12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 TBC1D2Q9BYX2 928 aa12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 ANAPC4Q9UJX5 808 aa12.47□□□□□ -0.41
CYCSP55-201ENST00000399027 MINDY4BA8MYZ0 360 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 AOC2O75106 756 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 FGAP02671 866 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 ASNSP08243 561 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 PTPRAP18433 802 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 CDK8P49336 464 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 PPARAQ07869 468 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 PPIL2Q13356 520 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 CERKLQ49MI3 558 aaPredicted RBP12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 DYNLL2Q96FJ2 89 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 OTUD5Q96G74 571 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
CYCSP55-201ENST00000399027 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 CDC45O75419 566 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 TM4SF4P48230 202 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 JAG1P78504 1218 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 KIF23Q02241 960 aaPredicted RBP12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 GRM1Q13255 1194 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 SLC44A5Q8NCS7 719 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 PICK1Q9NRD5 415 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 AFG3L2Q9Y4W6 797 aa12.45□□□□□ -0.42
CYCSP55-201ENST00000399027 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 USP17L5A8MUK1 530 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 IRF6O14896 467 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 GDF11O95390 407 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 FGRP09769 529 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 INHBEP58166 350 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 ABCB5Q2M3G0 1257 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 SHROOM1Q2M3G4 852 aaPredicted RBP12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 CCDC17Q96LX7 622 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 ZNF287Q9HBT7 754 aa12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.44□□□□□ -0.42
CYCSP55-201ENST00000399027 CXCL11O14625 94 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 GH2P01242 217 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 SLC3A2P08195 630 aaKnown RBP12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 RASA1P20936 1047 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 GUCY1A2P33402 732 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 GTF2A2P52657 109 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 PDE4BQ07343 736 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 MKRN3Q13064 507 aaKnown RBP12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 MAP4K1Q92918 833 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 WDR18Q9BV38 432 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 AS3MTQ9HBK9 375 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 PLIN4Q96Q06 1357 aa12.43□□□□□ -0.42
CYCSP55-201ENST00000399027 PCP11498 1178 aaKnown RBP12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 AKR1B1P15121 316 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 MAP2K1Q02750 393 aaPredicted RBP12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 PTH1RQ03431 593 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 CTDSPL2Q05D32 466 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 SNAPC2Q13487 334 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 TMEM179Q6ZVK1 233 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 ZNF280CQ8ND82 737 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 LSG1Q9H089 658 aaKnown RBP12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 NBPF3Q9H094 633 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 CABP5Q9NP86 173 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 CTNNA3Q9UI47 895 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 TACC3Q9Y6A5 838 aa12.42□□□□□ -0.42
CYCSP55-201ENST00000399027 A0A0G2JLL6 359 aaPredicted RBP12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 ZNF213O14771 459 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 ORC4O43929 436 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 CETPP11597 493 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 MOGSQ13724 837 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 SH3D19Q5HYK7 790 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 PRRT2Q7Z6L0 340 aaPredicted RBP12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 CCDC84Q86UT8 332 aaPredicted RBP12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 STAG1Q8WVM7 1258 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 MKNK2Q9HBH9 465 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 WBP1LQ9NX94 342 aa12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
CYCSP55-201ENST00000399027 IGKV6D-41A0A0C4DH26 115 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 NT5C2P49902 561 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 SPP2Q13103 211 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 SEPT2Q15019 361 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 RAB3GAP1Q15042 981 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 IMMTQ16891 758 aaKnown RBP12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 AKNAD1Q5T1N1 836 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 STK11IPQ8N1F8 1099 aa12.4□□□□□ -0.42
CYCSP55-201ENST00000399027 BRI3BPQ8WY22 251 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms