RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 FAM13AO94988 1023 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 HPXP02790 462 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 ESR1P03372 595 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 FGD1P98174 961 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 GRM2Q14416 872 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 TIGD5Q53EQ6 642 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 ARMCX6Q7L4S7 300 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 SULF2Q8IWU5 870 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 CXorf38Q8TB03 319 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 RIN3Q8TB24 985 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 SGPP1Q9BX95 441 aa4.93□□□□□ -1.62
CD47-203ENST00000398258 CCDC9Q9Y3X0 531 aaKnown RBP4.93□□□□□ -1.62
CD47-203ENST00000398258 OTOL1A6NHN0 477 aaPredicted RBP4.92□□□□□ -1.62
CD47-203ENST00000398258 DCDC2CA8MYV0 355 aa4.92□□□□□ -1.62
CD47-203ENST00000398258 HK2P52789 917 aa4.92□□□□□ -1.62
CD47-203ENST00000398258 ZNF211Q13398 564 aaPredicted RBP4.92□□□□□ -1.62
CD47-203ENST00000398258 SSPNQ14714 243 aa4.92□□□□□ -1.62
CD47-203ENST00000398258 C12orf40Q86WS4 652 aa4.92□□□□□ -1.62
CD47-203ENST00000398258 GZF1Q9H116 711 aaPredicted RBP4.92□□□□□ -1.62
CD47-203ENST00000398258 IVNS1ABPQ9Y6Y0 642 aa4.92□□□□□ -1.62
CD47-203ENST00000398258 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 RASIP1Q5U651 963 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 C22orf34Q6ZV56 151 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 SND1Q7KZF4 910 aaKnown RBP eCLIP4.91□□□□□ -1.62
CD47-203ENST00000398258 MFSD4AQ8N468 514 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 GRIN3AQ8TCU5 1115 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 PANK1Q8TE04 598 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 MYLIPQ8WY64 445 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 UBE2FQ969M7 185 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 ADAMTS10Q9H324 1103 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 C19orf44Q9H6X5 657 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 FBRSQ9HAH7 460 aa4.91□□□□□ -1.62
CD47-203ENST00000398258 FAM155AB1AL88 458 aaPredicted RBP4.9□□□□□ -1.63
CD47-203ENST00000398258 ARNTP27540 789 aa4.9□□□□□ -1.63
CD47-203ENST00000398258 CCDC74AQ96AQ1 378 aa4.9□□□□□ -1.63
CD47-203ENST00000398258 TMEM39AQ9NV64 488 aa4.9□□□□□ -1.63
CD47-203ENST00000398258 GPN3Q9UHW5 284 aaPredicted RBP4.9□□□□□ -1.63
CD47-203ENST00000398258 TMEM59LQ9UK28 342 aa4.9□□□□□ -1.63
CD47-203ENST00000398258 ABL1P00519 1130 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 FKBP4Q02790 459 aaKnown RBP eCLIP4.89□□□□□ -1.63
CD47-203ENST00000398258 TMCO4Q5TGY1 634 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 PI16Q6UXB8 463 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 RGS22Q8NE09 1264 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 FEZF2Q8TBJ5 459 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 EPS8L3Q8TE67 593 aaKnown RBP4.89□□□□□ -1.63
CD47-203ENST00000398258 ZSWIM5Q9P217 1185 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 EGFL7Q9UHF1 273 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 KCTD3Q9Y597 815 aa4.89□□□□□ -1.63
CD47-203ENST00000398258 CPNE3O75131 537 aaKnown RBP4.88□□□□□ -1.63
CD47-203ENST00000398258 ADRB1P08588 477 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 RAC2P15153 192 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 SERPINB4P48594 390 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 SLBPQ14493 270 aaKnown RBP eCLIP4.88□□□□□ -1.63
CD47-203ENST00000398258 NKG7Q16617 165 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 SFRP5Q5T4F7 317 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 ZNF605Q86T29 641 aa4.88□□□□□ -1.63
CD47-203ENST00000398258 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
CD47-203ENST00000398258 GADD45BO75293 160 aaPredicted RBP4.87□□□□□ -1.63
CD47-203ENST00000398258 MFAP1P55081 439 aaKnown RBP4.87□□□□□ -1.63
CD47-203ENST00000398258 FCGRTP55899 365 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 TNK2Q07912 1038 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 SF3B2Q13435 895 aaKnown RBP4.87□□□□□ -1.63
CD47-203ENST00000398258 TCERG1LQ5VWI1 586 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 THAP5Q7Z6K1 395 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 CRELD1Q96HD1 420 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 MIPEPQ99797 713 aa4.87□□□□□ -1.63
CD47-203ENST00000398258 SOWAHDA6NJG2 315 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 EIF1AYO14602 144 aaKnown RBP4.86□□□□□ -1.63
CD47-203ENST00000398258 GPR182O15218 404 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 FANCGO15287 622 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 PAGE1O75459 146 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 LRIG2O94898 1065 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 CBX7O95931 251 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 EFEMP2O95967 443 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 CELA3BP08861 270 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 BMP6P22004 513 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 NME2P22392 152 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 GALK1P51570 392 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 DTHD1Q6ZMT9 781 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 SYT8Q8NBV8 401 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 ACSBG1Q96GR2 724 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 FAM129BQ96TA1 746 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 ADAM7Q9H2U9 754 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 EPB41L4AQ9HCS5 686 aaPredicted RBP4.86□□□□□ -1.63
CD47-203ENST00000398258 TPX2Q9ULW0 747 aaKnown RBP4.86□□□□□ -1.63
CD47-203ENST00000398258 MTMR7Q9Y216 660 aa4.86□□□□□ -1.63
CD47-203ENST00000398258 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 SEMA7AO75326 666 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 PI3P19957 117 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 PPP2R3AQ06190 1150 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 INPP5AQ14642 412 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 ZDHHC14Q8IZN3 488 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 EBF1Q9UH73 591 aa4.85□□□□□ -1.63
CD47-203ENST00000398258 H3BRB1 525 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 PEX10O60683 326 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 ZGLP1P0C6A0 271 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 PTPN11Q06124 597 aaPredicted RBP4.84□□□□□ -1.63
CD47-203ENST00000398258 EFEMP1Q12805 493 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 CCDC27Q2M243 656 aa4.84□□□□□ -1.63
CD47-203ENST00000398258 VMACQ2NL98 169 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms