RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PKP1Q13835 747 aa22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 NBPF9Q3BBW0 867 aa22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 ZSCAN29Q8IWY8 852 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 ZNF444Q8N0Y2 327 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 ZNF274Q96GC6 653 aaPredicted RBP22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 LY9Q9HBG7 655 aa22.62■■□□□ 1.21
PDLIM2-204ENST00000397760 KLF18A0A0U1RQI7 1052 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 TSPY2A6NKD2 308 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 PDIA3P30101 505 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 LIFRP42702 1097 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 IQCA1Q86XH1 822 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 PPP1R9BQ96SB3 815 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 DDTLA6NHG4 134 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 GRIN3BO60391 1043 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 EGFRP00533 1210 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 TFAP4Q01664 338 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 GABPAQ06546 454 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 ST3GAL1Q11201 340 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 WTAPQ15007 396 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 NFXL1Q6ZNB6 911 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 SH3BP5LQ7L8J4 393 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 ANP32BQ92688 251 aaKnown RBP22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 ZSCAN10Q96SZ4 725 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 VEZTQ9HBM0 779 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 SENP2Q9HC62 589 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 SERPINB13Q9UIV8 391 aa22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.61■■□□□ 1.21
PDLIM2-204ENST00000397760 TNKSO95271 1327 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 H7C1D1 291 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 PFKFB2O60825 505 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 MBD3O95983 291 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 RASA1P20936 1047 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 FKBP1CQ5VVH2 108 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 SAMD7Q7Z3H4 446 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 GTF3C6Q969F1 213 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 MYH1P12882 1939 aa22.6■■□□□ 1.21
PDLIM2-204ENST00000397760 SBF1O95248 1867 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 TBC1D10BQ4KMP7 808 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 SGMS1Q86VZ5 419 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 TMTC2Q8N394 836 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 TRIM44Q96DX7 344 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 EHD4Q9H223 541 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 PI4KBQ9UBF8 816 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 SWAP70Q9UH65 585 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 ECM29Q5VYK3 1845 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 CCDC69A6NI79 296 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 NASPP49321 788 aaPredicted RBP22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 SEC23AQ15436 765 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 FAM151AQ8WW52 585 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 GPRC5DQ9NZD1 345 aa22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 DICER1Q9UPY3 1922 aaKnown RBP22.59■■□□□ 1.21
PDLIM2-204ENST00000397760 UTRNP46939 3433 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 GOLGA8BA8MQT2 603 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 DDNO94850 711 aaPredicted RBP22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 TSPY3P0CV98 308 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 TSPY8P0CW00 308 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 SCRN1Q12765 414 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 KIF4BQ2VIQ3 1234 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 ZSCAN23Q3MJ62 389 aa22.58■■□□□ 1.21
PDLIM2-204ENST00000397760 CCT2P78371 535 aaKnown RBP22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 ENAHQ8N8S7 591 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 ATRNL1Q5VV63 1379 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 ESPNB1AK53 854 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 NMT2O60551 498 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 APOA5Q6Q788 366 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 FOXP4Q8IVH2 680 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 SMC3Q9UQE7 1217 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 SLC12A7Q9Y666 1083 aa22.57■■□□□ 1.2
PDLIM2-204ENST00000397760 PRPF40AO75400 957 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 IFIT1BQ5T764 474 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 CAVIN1Q6NZI2 390 aaKnown RBP22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 FAM83AQ86UY5 434 aa22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 RAB11FIP4Q86YS3 637 aa22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 HPS5Q9UPZ3 1129 aa22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 CNTNAP1P78357 1384 aa22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
PDLIM2-204ENST00000397760 EPS15P42566 896 aa22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 SYNE3Q6ZMZ3 975 aa22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 CSRNP1Q96S65 589 aa22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 TRIM34Q9BYJ4 488 aa22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 NCOA5Q9HCD5 579 aaKnown RBP22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 TCP11L1Q9NUJ3 509 aa22.55■■□□□ 1.2
PDLIM2-204ENST00000397760 ZBTB43O43298 467 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 SLURP2P0DP57 97 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 SHMT1P34896 483 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 CCDC178Q5BJE1 867 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 NEDD1Q8NHV4 660 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 IL17RBQ9NRM6 502 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 TAOK2Q9UL54 1235 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 DTNBO60941 627 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 TNNI2P48788 182 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 TMEM39BQ9GZU3 492 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 DNAJC18Q9H819 358 aa22.54■■□□□ 1.2
PDLIM2-204ENST00000397760 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 METAP2P50579 478 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 DPY19L2Q6NUT2 758 aa22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 METTL16Q86W50 562 aaKnown RBP22.53■■□□□ 1.2
PDLIM2-204ENST00000397760 MICU3Q86XE3 530 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms