RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 KDM4AO75164 1064 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 HSP90AA2PQ14568 343 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 FMNL3Q8IVF7 1028 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 MKL1Q969V6 931 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 ZSCAN10Q96SZ4 725 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 CD209Q9NNX6 404 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 DAAM1Q9Y4D1 1078 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 MMP1P03956 469 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SNHG28P0DPA3 235 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 TOP1P11387 765 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 TXLNAP40222 546 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SASS6Q6UVJ0 657 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 APPP05067 770 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 ZNF165P49910 485 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SF3A1Q15459 793 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 PRIMPOLQ96LW4 560 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 GOLGA8AA7E2F4 631 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 FIBPO43427 364 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 GABPAQ06546 454 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 KRT40Q6A162 431 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 GPT2Q8TD30 523 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 AKT1S1Q96B36 256 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 TNMDQ9H2S6 317 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 RAI14Q9P0K7 980 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 KIAA1468Q9P260 1216 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SMC2O95347 1197 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 FDPSP14324 419 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SSRP1Q08945 709 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 FAM83AQ86UY5 434 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 CELF1Q92879 486 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 ZNF330Q9Y3S2 320 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 SLC4A4Q9Y6R1 1079 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 FOSP01100 380 aaPredicted RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 KRT25Q7Z3Z0 450 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 ZDHHC15Q96MV8 337 aa6.74□□□□□ -1.33
PTPRD-206ENST00000397617 QTRT2Q9H974 415 aaKnown RBP6.74□□□□□ -1.33
PTPRD-206ENST00000397617 BAZ2AQ9UIF9 1905 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 KIF20AO95235 890 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 HLA-DOAP06340 250 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 MAGEB6Q8N7X4 407 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 ALG1Q9BT22 464 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 ZSWIM5Q9P217 1185 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 LOXHD1Q8IVV2 1947 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 GREB1LQ9C091 1923 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 CBFA2T2O43439 604 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 SH2D4AQ9H788 454 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 EPB41L4AQ9HCS5 686 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 C16orf86Q6ZW13 317 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 FMR1NBQ8N0W7 255 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 FAM217BQ9NTX9 383 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 SRPRBQ9Y5M8 271 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 CTDNEP1O95476 244 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 LONP1P36776 959 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 GHRHRQ02643 423 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 DNM1Q05193 864 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 IQUBQ8NA54 791 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 SDF4Q9BRK5 362 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 EDEM3Q9BZQ6 932 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 RMND1Q9NWS8 449 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 TPM2P07951 284 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 PPP2R3AQ06190 1150 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 RTKN2Q8IZC4 609 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 SERPINB13Q9UIV8 391 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 MYH1P12882 1939 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 TYRO3Q06418 890 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 ERFEQ4G0M1 354 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 MEX3CQ5U5Q3 659 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 ZMYND12Q9H0C1 365 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 MAP3K20Q9NYL2 800 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 DDX60LQ5H9U9 1706 aaKnown RBP6.73□□□□□ -1.33
PTPRD-206ENST00000397617 MYH8P13535 1937 aa6.73□□□□□ -1.33
PTPRD-206ENST00000397617 OSBPL5Q9H0X9 879 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 NYAP2Q9P242 653 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PALM3A6NDB9 673 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 LRRC10BA6NIK2 292 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 TBX3O15119 743 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 SLFN14P0C7P3 912 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 GOLGA6L19H0YKK7 550 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 POLRMTO00411 1230 aaKnown RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 KCNQ2O43526 872 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 RPS12P25398 132 aaKnown RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 GRM4Q14833 912 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PTPAQ15257 358 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 EDC3Q96F86 508 aaKnown RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 KANSL2Q9H9L4 492 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 M0R2C6 588 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 TBC1D9BQ66K14 1250 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 CDC37L1Q7L3B6 337 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 KCNG1Q9UIX4 513 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 LOC102724159A0A0B4J2E5 919 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 UNCXA6NJT0 531 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 SCG2P13521 617 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 KCNB1Q14721 858 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PWP2Q15269 919 aaKnown RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 PFKFB3Q16875 520 aaPredicted RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 DIS3L2Q8IYB7 885 aaKnown RBP6.72□□□□□ -1.33
PTPRD-206ENST00000397617 CCDC51Q96ER9 411 aa6.72□□□□□ -1.33
PTPRD-206ENST00000397617 DACT1Q9NYF0 836 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms